List of bacterial orders

From Wikipedia, the free encyclopedia

This article lists the orders of the Bacteria. The currently accepted taxonomy is based on the List of Prokaryotic names with Standing in Nomenclature (LPSN)[1] and National Center for Biotechnology Information (NCBI)[2] and the phylogeny is based on 16S rRNA-based LTP release 132 by The All-Species Living Tree Project.[3]

Phylogeny

Summarize
Perspective

National Center for Biotechnology Information (NCBI) taxonomy was initially used to decorate the genome tree via tax2tree. The 16S rRNA-based Greengenes taxonomy is used to supplement the taxonomy particularly in regions of the tree with no cultured representatives. List of Prokaryotic names with Standing in Nomenclature (LPSN) is used as the primary taxonomic authority for establishing naming priorities. Taxonomic ranks are normalised using phylorank and the taxonomy manually curated to remove polyphyletic groups.[4][5][6][7][8]

Cladogram was taken from GTDB release 09-RS220 (24 April 2024).[9][10][11]

Bacteria
Chloroflexae

Chloroflexota

Bacillati

"Sysuimicrobiota"

Armatimonadota

Vulcanimicrobiota

Bacillota G

Bacillota E

Bacillota s.s.

"Desulfotomaculota" (Bacillota B)

"Selenobacteria" (Bacillota C)

Bacillota D

"Halanaerobiaeota" (Bacillota F)

Bacillota A

"Actinobacteriobiontes"

Actinomycetota

"Bipolaricaulota"

Deinococcota

Cyanoprokaryota

"Margulisiibacteriota"

Cyanobacteria

"CPR"

"Patescibacteria"

Thermotogati
"Synergistetes"
"Thermocalda"

Dictyoglomerota

"Thermodesulfobiota"

Thermotogota

"Pseudomonadati"

"Lindowiibacteriota"

"Walliibacteriota"

"Muiribacteriota"

"Rifleibacteriota"

"Macinerneyibacteriota"

Spirochaetota

"Poribacteriota"

"Goldiibacteriota"

"Firestoneibacteriota"

"Desantisiibacteriota"

"Aerophobota"

Elusimicrobiota

"Ratteibacteriota"

"Omnitrophota"

UBA1439

PUNC01

JAKLEM01

"Auribacterota"

JACPWU01

Chlamydiota

Verrucomicrobiota

"FCB group"

"Hinthialibacterota"

"Sumerlaeota"

"Abyssubacteria"

"Hydrogenedentota"

"Coatesiibacteriota" [RBG-13-66-14]

Planctomycetota

"Proteobacteria"

"FCB group"

"Hydrothermota" (WOR-3)

"Cloacimonadota"

Fibrobacterota

"Fermentibacterota"

"Effluvivivacota" (VGIX01)

"Eiseniibacteriota"

"Krumholzibacteriota"

Gemmatimonadota

"Edwardsiibacteriota"

"Latescibacterota"

"Zixiibacteriota"

"Delongiibacteriota"

"Electryoneota" (AABM5-125-24)

"Marinisomatota"

Calditrichota

"Cosmopoliota"

"Zhuqueibacterota"

Bacteroidota

"Proteobacteria"

Acidobacteriota

"Deltabacteria"

"Moduliflexota"

"Methylomirabilota"

"Schekmaniibacteriota"

"Tectimicrobiota"

Nitrospinota

Nitrospirota

"Lambdaproteobacteria" {SAR324}

Bdellovibrionota

"Binatota" (Desulfobacterota B)

"Deferrisomatota" (Desulfobacterota C)

"Lernaellota" (FEN-1099)

Myxococcota

"Deferrimicrobiota" (Desulfobacterota E)

Thermodesulfobacteriota

"Aquificida"

Syntrophorhabdia {Desulfobacterota G}

"Dadaibacteriota" (Desulfobacterota D)

"Acidulodesulfobacteriota"

"Thermosulfidibacterota"

Aquificota

"Calescibacteriota"

Desulfurellia {Campylobacterota_A}

"Leptospirillaeota"

Pseudomonadota

Kingdom Bacillati

Summarize
Perspective

Phylum Chloroflexota

Phylogeny of Chloroflexota[9][10][11]
"Dormibacteria"

"Dormibacterales"

"Limnocylindria"

"Limnocylindrales"

Ktedonobacteria

Ktedonobacterales

"Dehalococcoidotia"

Tepidiformales

"Lucifugimonadales"

"Australimonadales"

"Monstramariales"

Dehalococcoidales

Dehalococcoidia
"Caldilineotia"

Ardenticatenales

"Epilineales"

"Caldilineidae"

Caldilineales

"Anaerolineidae"

J036

Thermoflexales

"Promineofilales"

Aggregatilineales

Anaerolineales

"Caldilineia"
"Chloroflexotia"

"Thermobaculales"

Thermomicrobiales

Chloroflexales

Chloroflexia
  • Class "Bathosphaeria" Mehrshad et al. 2018
    •  ?"Bathosphaerales" Mehrshad et al. 2018 [JG30-KF-CM66]
  • Class "Martimicrobia" Williams et al. 2024
    •  ?"Martimicrobiales" Williams et al. 2024
  • Class ?"Poriflexia" Kogawa et al. 2022
  • Class "Spiritibacteria" Williams et al. 2024
    •  ?"Spiritibacterales" Williams et al. 2024
  • Class "Tarhunnaeia" Williams et al. 2024
    •  ?"Tarhunnaeales" Williams et al. 2024
  • Class "Uliximicrobia" Williams et al. 2024
    •  ?"Uliximicrobiales" Williams et al. 2024
  • Class "Umbricyclopia" Mehrshad et al. 2018
    •  ?"Umbricyclopales" Mehrshad et al. 2018 (TK10)
  • Class "Dormiibacteria" (sic) Montgomery et al. 2021 (AD3)
    •  ?"Aeolococcales" Montgomery et al. 2021
    • "Dormibacterales" (sic) Montgomery et al. 2021
  • Class "Limnocylindria" Mehrshad et al. 2018
    • "Limnocylindrales" Mehrshad et al. 2018 (SL56)
  • Class Ktedobacteria corrig. Cavaletti et al. 2007
    • Ktedobacterales corrig. Cavaletti et al. 2007 (Thermogemmatisporales)
  • Class Dehalococcoidia Löffler et al. 2013
    • "Australimonadales" Prabhu et al. 2024 [UBA2963]
    • Dehalococcoidales Löffler et al. 2013
    • "Lucifugimonadales" Lim et al. 2023 [UBA1151]
    • "Monstramariales" Landry et al. 2017 [UBA11650; UBA3495]
    • Tepidiformales Kochetkova et al. 2020
  • Class "Caldilineia" Oren, Parte & Garrity 2016 ex Cavalier-Smith 2020
    • Aggregatilineales Nakahara et al. 2019 ("Phototrophicales")
    • Anaerolineales Yamada et al. 2006
    • Ardenticatenales Kawaichi et al. 2013
    • Caldilineales Yamada et al. 2006
    • "Epilineales" Petriglieri et al. 2023
    • "Roseilineaceae" Ward et al. 2021 {J036}
    • "Promineifilales" corrig. Chuvochina et al. 2023
    • Thermoflexales Dodsworth et al. 2014
  • Class Chloroflexia Gupta et al. 2013

Phylum "Sysuimicrobiota"

  • Class "Sysuimicrobiia" Liu et al. 2024 [CSP1-3]
    • "Sysuimicrobiales" Liu et al. 2024

Phylum Armatimonadota

Phylogeny of Armatimonadota[9][10][11]
"Heboniibacteriia"

"Heboniibacterales"

"Zipacnadia"

"Zipacnadales"

Abditibacteriia

Abditibacteriales

HRBIN17

HRBIN17

UBA5829

UBA5829

Fimbriimonadia

Fimbriimonadales

Chthonomonadetes

Chthonomonadales

Armatimonadia

Armatimonadales

  • Class "Heboniibacteriia" corrig. Carlton et al. 2023 (CAIYQO01)
    • "Heboniibacterales" corrig. Carlton et al. 2023
  • Class "Zipacnadia" Carlton et al. 2023 (UBA5377)
    • "Zipacnadales" Carlton et al. 2023
  • Class Abditibacteriia Tahon et al. 2018 (FBP)
  • Class HRBIN17
    • "Candidatus Fervidibacter" Rinke et al. 2013 {HRBIN17: HRBIN17} (OctSpa1-106)
  • Class UBA5829
    • "Candidatus Hippobium" Gilroy et al. 2022 {UBA5829: UBA5829}
  • Class Fimbriimonadia Im et al. 2012
    • Fimbriimonadales Im et al. 2012
  • Class Chthonomonadia Oren, Parte & Garrity 2016
    • Chthonomonadales Lee et al. 2011
  • Class Armatimonadia Tamaki et al. 2011 (OP10)
    • Armatimonadales Tamaki et al. 2011 (Capsulimonadales)

Phylum Vulcanimicrobiota

Phylogeny of Vulcanimicrobiota[9][10][11]
"Xenobia"

"Xenobiales"

Vulcanimicrobiia

"Eremiobacterales"

Vulcanimicrobiales

  • Class "Eudoremicrobiia" Paoli et al. 2022
    •  ?"Eudoremicrobiales" Paoli et al. 2022
  • Class "Xenobia" Ji et al. 2021 (UBP9)
    • "Xenobiales" Ji et al. 2021
  • Class "Eremiobacteriia" corrig. Ward, Cardona & Holland-Moritz 2019 (WPS2)
    • "Eremiobacterales" Ward, Cardona & Holland-Moritz 2019
    • "Vulcanimicrobiales Yabe et al. 2024 ("Baltobacterales"; "Palusbacterales"; "Rubrimentiphilales")

Clade Firmicutes

Firmicutes incertae sedis

  • Class Desulfitisporia Sorokin & Merkel 2023
    • Desulfitisporales Sorokin & Merkel 2023
  • Class Fermentithermobacillia Kadnikov et al. 2023
    • Fermentithermobacillales Kadnikov et al. 2023
  • Class Thermolithobacteria Sokolova et al. 2007
    • Thermolithobacterales Sokolova et al. 2007

Phylum Bacillota G

  • Class Limnochordia Watanabe, Kojima & Fukui 2015
    • Limnochordales Watanabe, Kojima & Fukui 2015
  • Class "Hydrogenisporia" Pallen, Rodriguez-R & Alikhan 2022
    • "Capillibacteriales" Pallen, Rodriguez-R & Alikhan 2022 [UBA10575]
    • "Hydrogenisporales" Pallen, Rodriguez-R & Alikhan 2022 [UBA8346]

Phylum Bacillota E

Phylogeny of Bacillota E[9][10][11]
UBA3575

UBA3575

Thermaerobacteria

Thermaerobacterales

Symbiobacteriia

Symbiobacteriales

Sulfobacillia

Sulfobacillales

  • Class UBA3575
    • "Candidatus Acetocimmeria" Smith et al. 2021 {UBA3575: UBA3575}
  • Class Thermaerobacteria Chuvochina et al. 2024
    • Thermaerobacterales Chuvochina et al. 2024
  • Class Symbiobacteriia Chuvochina et al. 2024
    • Symbiobacteriales Chuvochina et al. 2024
  • Class Sulfobacillia Chuvochina et al. 2024
    • Sulfobacillales Chuvochina et al. 2024

Phylum "Selenobacteria"

Phylogeny of Selenobacteria[9][10][11]

Veillonellales

Acidaminococcales

"Sporomusales" A

UPPP01

"Sporomusales" C

"Sporomusales"

UMGS1260

DSM-13327

Propionisporales

Anaeromusales

"Dendrosporobacterales"

Selenomonadales

  • Class Selenomonadia Oren, Parte & Garrity 2016
    • Acidaminococcales Campbell, Adeolu & Gupta 2015
    • Anaeromusales Chuvochina et al. 2024
    • "Dendrosporobacterales" Pallen, Rodriguez-R & Alikhan 2022
    • "Pelosinaceae" {DSM-13327}
    • Propionisporales Chuvochina et al. 2024
    • Selenomonadales Marchandin et al. 2010
    • "Acetonemaceae" {Sporomusales_A}
    • "Sporomusales"_C
    • "Sporomusales" Cavalier-Smith 2006
    • "Pelorhabdus" {UMGS1260: UMGS1260}
    • Lucifera Sanchez-Andrea et al. 2018 {UPPP01: UPPP01}
    • Veillonellales Campbell, Adeolu & Gupta 2015

Phylum "Desulfotomaculota"

Phylogeny of Desulfotomaculota[9][10][11]
Peptococcia

"Thermanaerosceptrales"

Peptococcales

"Dehalobacteriia"

"Dehalobacteriales"

"Avidehalobacterales"

"Cryptoclostridiales"

Desulfitobacteriia

"Heliobacteriales"

Desulfitobacteriales

"Moorellia"

DULZ01

Desulfitibacterales

Calderihabitantales

Moorellales

DSM12270

Thermacetogeniales

Syntrophomonadia

Syntrophomonadales

"Carboxydocellia"

Carboxydocellales

Thermincolia

Thermincolales

"Carboxydothermia"

Carboxydothermales

Desulfotomaculia

Ammonificales

Desulfotomaculales

  • Class Peptococcia Chuvochina et al. 2024
    • Peptococcales Chuvochina et al. 2024
    • "Thermanaerosceptrales" Pallen, Rodriguez-R & Alikhan 2022 [DRI-13]
  • Class "Dehalobacteriia"
    • "Avidehalobacterales" Pallen, Rodriguez-R & Alikhan 2022 [UBA4068]
    • "Cryptoclostridiales" Pallen, Rodriguez-R & Alikhan 2022 [UBA7702]
    • "Dehalobacteriales"
  • Class Desulfitobacteriia Chuvochina et al. 2024
    • Desulfitobacteriales Chuvochina et al. 2024
    • "Heliobacteriales" Kinman 1994 ex Cavalier-Smith 2020
  • Class "Moorellia"
    • Calderihabitantales Chuvochina et al. 2024
    • Desulfitibacterales Chuvochina et al. 2024
    • Zhaonellaceae Lv et al. 2020 {DULZ01}
    • Moorellales Lv et al. 2020
  • Class DSM-12270
    • Thermacetogeniales Chuvochina et al. 2024
  • Class Syntrophomonadia Chuvochina et al. 2024
    • Syntrophomonadales Chuvochina et al. 2024
  • Class "Carboxydocellia" Pallen, Rodriguez-R & Alikhan 2022
    • "Carboxydocellales Chuvochina et al. 2024
  • Class Thermincolia Chuvochina et al. 2024
    • "Thermincolales Chuvochina et al. 2024
  • Class "Carboxydothermia" Pallen, Rodriguez-R & Alikhan 2022
    • Carboxydothermales Chuvochina et al. 2024
  • Class Desulfotomaculia Chuvochina et al. 2024
    • Ammonificales corrig. Chuvochina et al. 2024
    • Desulfotomaculales Chuvochina et al. 2024

Phylum Bacillota D

Phylogeny of Bacillota D[9][10][11]
"Proteinivoracia"

"Proteinivoracales"

Natranaerobiia

Natranaerobiales

"Dethiobacteria"

SKNC01

"Dethiobacterales"

  • Class "Proteinivoracia"
    • "Proteinivoracales"
  • Class "Dethiobacteria" Sorokin & Merkel 2022
    • "Candidatus Contubernalis" corrig. Zhilina et al. 2005 {SKNC01: SKNC01}
    • "Dethiobacterales" Sorokin & Merkel 2022
  • Class Natranaerobiia Chuvochina et al. 2024

Phylum "Halanaerobiaeota"

Phylogeny of Halanaerobiia[9][10][11]

"Anoxybacterales"

Halanaerobiales

Halobacteroidales

  • Class "Halanaerobiia" Cavalier-Smith 2020
    • "Anoxybacterales" Pallen, Rodriguez-R & Alikhan 2022 {DY22613}
    • Halanaerobiales corrig. Rainey & Zhilina 1995
    • Halobacteroidales Chuvochina et al. 2024

Phylum Bacillota A

Phylogeny of Bacillota A[9][10][11]
Thermosediminibacteria

Koleobacterales

Thermosediminibacterales

"Thermoanaerobacteria"

Caldicellulosiruptorales

Thermoanaerobacterales

Clostridiia

Mahellales

Caldicoprobacterales

Lutisporales

Clostridiales

Eubacteriales

Tissierellales

Peptostreptococcales

Christensenellales

"Merdicolales"

"Egerieisomatales"

"Saccharofermentanales"

Acetivibrionales A

Acetivibrionales

"Petroclostridiales"

Monoglobales

"Avimonoglobales"

"Oscillospirales"

Lachnospirales

  • Class Thermosediminibacteria Chuvochina et al. 2024
  • Class "Thermoanaerobacteria"
  • Class "Clostridiia" Oren, Parte & Garrity 2016
    • "Thermoclostridiaceae" Pallen, Rodriguez-R & Alikhan 2022 {"Acetivibrionales" A}
    • Acetivibrionales Chuvochina et al. 2024
    • "Avimonoglobales" Pallen, Rodriguez-R & Alikhan 2022 [UBA1381]
    • Caldicoprobacterales Chuvochina et al. 2024
    • Christensenellales Parks et al. 2018 ex Chuvochina et al. 2024 ("Borkfalkiales"; "Comantemales")
    • Clostridiales Prevot 1953 s.s. ("Plectridiales")
    •  ?"Darwinibacteriales" Puchol-Royo et al. 2023 [MBA03]
    • "Egerieisomatales" Pallen, Rodriguez-R & Alikhan 2022 [UBA1212]
    • Eubacteriales Buchanan 1917
    • Lachnospirales Chuvochina et al. 2024
    • Lutisporales Chuvochina et al. 2024
    • Mahellales Chuvochina et al. 2024
    • "Merdicolales" Pallen, Rodriguez-R & Alikhan 2022 [TANB77]
    • Monoglobales Chuvochina et al. 2024
    • "Oscillospirales" Glendinning et al. 2020
    • "Petroclostridiales" Pallen, Rodriguez-R & Alikhan 2022 [SK-Y3]
    • Peptostreptococcales Chuvochina et al. 2024
    • "Saccharofermentanales" corrig. Parks et al. 2018
    • Tissierellales Alauzet et al. 2020

Phylum Mycoplasmatota

Phylogeny of Mycoplasmatota[9][10][11]
Mycoplasmatota
Mollicutes

"Aphodocolales"

"Bathyoplasmales"

"Izemoplasmatales"

Acholeplasmatales

"Caccosomales"

Erysipelotrichales

Mycoplasmatales

  • Class Mollicutes Edward & Freundt 1967
    • Acholeplasmatales Freundt et al. 1984 (Anaeroplasmatales)
    • "Aphodocolales" Pallen, Rodriguez-R & Alikhan 2022
    • "Bathyoplasmales" corrig. Zhu, Lian & He 2020 [MAG-NZ]
    • "Caccosomales" (sic) Pallen, Rodriguez-R & Alikhan 2022 [RFN20]
    • Erysipelotrichales Ludwig et al. 2010
    • "Izemoplasmatales" corrig. Zheng et al. 2021
    • Mycoplasmatales Freundt 1955 ("Borrelomycetales"; "Anulomycetales"; "Paramycetales"; "Mollicutales"; "Pleuropneumoniales"; Entomoplasmatales, Mycoplasmoidales)

Phylum "Bacillota"

Phylogeny of Bacillota[9][10][11]
"Bacillia"

"Pasteuriales"

Kyrpidiales

Tumebacillales

Alicyclobacillales

Desulfuribacillales

Calditerricolales

Bacillales F

Thermicanales

"Brockiales"

Thermoactinomycetales

Paenibacillales

DSM-22679

Aneurinibacillales

Brevibacillales

Tepidibacillales

"Rubeoparvulales"

Caldalkalibacillales

Exiguobacteriales

"Harrysmithimonadales"

"Bacillidae"

Bacillales_B

Bacillales

Bacillales_C

Bacillales E

Bacillales K

Bacillales G

Bacillales H

Bacillales I

DSM-28697

Bacillales D

Planococcaceae {Bacillales_A}

Staphylococcales

Culicoidibacterales

Lactobacillales

  • Class "Bacillia" Cavalier-Smith 2020
    • Alicyclobacillales Chuvochina et al. 2024
    • Aneurinibacillales Chuvochina et al. 2024
    • "Bacillidae" Cavalier-Smith 2020 non Enderlein 1917
      • Bacillales_B
      • Bacillales_C
      • Bacillales_D
      • Bacillales_E
      • Bacillales_G
      • Bacillales_H
      • Bacillus marinisedimentorum Guo et al. 2018 {Bacillales_I:Bacillaceae_O}
      • Sporolactobacillaceae Ludwig et al. 2010 {Bacillales_K}
      • Bacillales Prevot 1953 s.s. (Caryophanales, "Caldibacillales")
      • Aureibacillaceae Li et al. 2024 {DSM-28697}
    • Planococcaceae {Bacillales_A}
    • "Bacillus thermozeamaize" Mak 2003 {Bacillales_F: Bacillaceae_M}
    • Brevibacillales Chuvochina et al. 2024
    • "Brockiales" Pallen, Rodriguez-R & Alikhan 2022
    • Caldalkalibacillales Chuvochina et al. 2024
    • Calditerricolales Chuvochina et al. 2024
    • Culicoidibacterales Neupane et al. 2020
    • Microaerobacter Khelifi et al. 2011 {DSM-22679: DSM-22679}
    • Desulfuribacillales Sorokin et al. 2021
    • Exiguobacteriales Chuvochina et al. 2024
    • Haloplasmatales Rainey et al. 2008 non Zhou et al. 2022
    • "Harrysmithimonadales" Pallen, Rodriguez-R & Alikhan 2022 [CAJFEE01]
    • Kyrpidiales Chuvochina et al. 2024
    • Lactobacillales Ludwig, Schleifer & Whitman 2010 ("Plocamobacteriales"; "Coccales")
    • Paenibacillales Chuvochina et al. 2024
    • "Pasteuriales" Pallen, Rodriguez-R & Alikhan 2022 [RES148]
    • "Rubeoparvulales"
    • Staphylococcales Chuvochina et al. 2024
    • Tepidibacillales Chuvochina et al. 2024
    • Thermicanales Chuvochina et al. 2024
    • Thermoactinomycetales Chuvochina et al. 2024
    • Tumebacillales Chuvochina et al. 2024
    • Turicibacteraceae Verbarg et al. 2020 {MOL361}

Phylum Actinomycetota

Phylogeny of Actinomycetota[9][10][11]
"Geothermincolia"

"Geohydrothermomicrobiales"

"Geothermincolales"

"Humimicrobiia"

"Hakubellales"

"Humimicrobiales"

"Aquicultoria"

"Aquicultorales"

"Geothermocultorales"

"Oleimmundimicrobiales"

"Subteraquimicrobiales"

Coriobacteriia

Anaerosomatales

Coriobacteriales

Clade Cyanoprokaryota

Phylum "Margulisiibacteriota"

Phylogeny of Margulisiibacteriota[9][10][11]

"Saganbacteria"

"Riflemargulisbacteria"

"Marinamargulisbacteria"

"Termititenacia"

  • Class "Saganbacteria" Carnevali et al. 2018 (WOR1)
  • Class "Marinamargulisbacteria" Carnevali et al. 2019
  • Class "Riflemargulisbacteria" Carnevali et al. 2019 (GWF2_35_9)
  • Class "Termititenacia" Utami et al. 2019
    • "Termititenacales" Utami et al. 2019

Phylum "Cyanobacteriota"

Phylogeny of Cyanobacteriota[9][10][11]
"Sericytochromatia"

UBA7694

S15B-MN24

Vampirovibrionia

"Caenarcanales"

"Obscuribacterales"

Vampirovibrionales

"Gastranaerophilales"

Cyanobacteria
"Gloeobacteria"

Gloeobacterales

"Phycobacteria"

Thermostichales

Prochlorotrichales

Gloeoemargaritales

Pseudanabenales

"Synechococcophycidae"

"Limnotrichales"

Prochlorotrichales

Synechococcales

Acaryochloridales

Neosynechococcales

B231

Leptolyngbyales

Nodosilineales

Oculatellales

"Nostocophycidae"

Cyanobacteriales

  • Class "Sericytochromatia" Soo et al. 2017
    • S15B-MN24 ["Sericytochromatia"; "Tanganyikabacteria"]
    • UBA7694 ["Blackallbacteria"]
  • Class Vampirovibrionia Chuvochina et al. 2024
    • "Caenarcaniphilales" Soo et al. 2014
    • "Gastranaerophilales" Di Rienzi et al. 2013
    • "Obscuribacterales" Soo et al. 2014
    • Vampirovibrionales Chuvochina et al. 2024
  • Class Gloeobacteria Cavalier-Smith 2002
  • Class Phycobacteria Cavalier-Smith 2002
    • Acaryochloridales Miyashita et al. 2003 ex Strunecký & Mareš 2022 ("Thermosynechococcales")
    •  ?Aegeococcales Strunecký & Mareš 2022
    • Trichothermofontia Daroch et al. 2023 {B231}
    • Cyanobacteriales Rippka & Cohen-Bazire 1983 (Chamaesiphonales, Chroococcales, Chroococcidiopsidales, Coleofasciculales, Desertifilales, Nostocales, Oscillatoriales, Pleurocapsales, Spirulinales, Stigonematales)
    •  ?"Eurycoccales"
    •  ?Geitlerinematales Strunecký & Mareš 2022
    • Gloeoemargaritales Moreira et al. 2016
    • Leptolyngbyales Strunecký & Mareš 2022
    • "Limnotrichales"
    • Neosynechococcales Chuvochina et al. 2024
    • Nodosilineales Strunecký & Mareš 2022 (Phormidesmidales)
    • Oculatellales Strunecký & Mareš 2022 (Elainellales)
    • Prochlorococcaceae Komárek & Strunecky 2020 {"PCC-6307"}
    • Prochlorotrichales Strunecký & Mareš 2022 [PCC-9006]
    • Pseudanabenales Hoffmann, Komárek & Kastovsky 2005
    • Synechococcales Hoffmann, Komárek & Kastovsky 2005
    • Thermostichales Komárek & Strunecký 2020

Kingdom Thermotogati

Summarize
Perspective

Phylum Atribacterota

  • Class Atribacteria Katayama et al. 2021 (OP9)
    • Atribacterales Katayama et al. 2021 ("Caldatribacteriales")
  • Class "Phoenicimicrobiia" Jiao et al. 2024 (JS1)
    • "Phoenicimicrobiales" Jiao et al. 2024 (SB-45)

Phylum Synergistota

Phylum "Zhurongbacterota"

Phylum Dictyoglomerota

Phylum "Thermodesulfobiota"

  • Class "Thermodesulfobiia" Frolov et al. 2022
    • "Thermodesulfobiales" Cavalier-Smith 2020

Phylum Coprothermobacterota

Phylum "Lithacetigenota"

  • Class "HKB111"
    • "HKB111"

Phylum Caldisericota

Phylum Thermotogota

Phylogeny of Thermotogota[9][10][11]

Mesoaciditogales

Petrotogales

Thermotogales

  • Class "Thermotogia" Oren, Parte & Garrity 2016 ex Cavalier-Smith 2020
    • Mesoaciditogales Itoh et al. 2016
    • Petrotogales Bhandari & Gupta 2014 (Kosmotogales)
    • Thermotogales Reysenbach 2002 emend. Bhandari & Gupta 2014

Clade Candidate Phyla Radiation

Summarize
Perspective

Phylum "Elulota"

  • Class "Elulimicrobiia" Rodriguez-R et al. 2020
    •  ?"Elulimicrobiales" Rodriguez-R et al. 2020
Phylogeny of Patescibacteria[9][10][11]

"Wirthbacteria" (CG2-30-54-11)

"Microgenomates"

"Dojkabacteria"

"Katanobacteria"

"Microgenomatia"

"Woykebacterales"

"Curtissbacterales"

"Daviesbacterales"

"Roizmanbacterales" (UBA1406)

"Gottesmanbacterales" (UBA10105)

"Levybacterales"

GWA2-44-7

"Chazhemtobacteriales"

"Shapirobacterales" (UBA12405)

cluster
"Saccharibacteria"

"Berkelbacteria"

"Kazanbacteria" (Kazan)

"Howlettbacteria"

"Saccharimonadia"

cluster
"Gracilibacteria"
"Absconditabacteria"

BD1-5

"Absconditabacterales"

"Gracilibacteria"

"Abawacabacterales" (RBG-16-42-10)

"Peregrinibacterales" (UBA1369)

"Fallacibacteriales" (DOLZORAL124_38_8; UBA4473)

"Peribacterales"

cluster
"Parcubacteria"

"Doudnabacteria"

"Andersenbacteria"

"Torokbacteria" (GCA-2792135)

ABY1

"Kerfeldbacterales" (SBBC01)

"Jacksonbacterales" (UBA9629)

"Komeilibacterales" (UBA1558)

"Kuenenbacterales" (UBA2196)

"Veblenbacterales"

"Uhrbacterales" (GWA2-46-9)

"Magasanikbacterales"

"Buchananbacterales"

"Falkowbacterales"

"Moisslbacterales" (UBA2591)

"Paceibacteria"

"Moranbacterales"

UBA6257

"Spechtbacterales"

"Terrybacterales"

"Parcunitrobacterales" (GWA2-38-13b)

"Portnoybacterales"

"Paceibacterales"

"Azambacterales" (UBA10092)

"Yanofskybacterales" (2-02-FULL-40-12)

"Sungbacterales"

"Ryanbacterales"

"Giovannonibacterales"

"Niyogibacterales"

"Tagabacterales"

UBA9973

cluster

Phylum "Patescibacteria"

  • Class "Wirthbacteria"
  • Class "Dojkabacteria" (WS6)
  • Class "Katanobacteria" (WWE3)
  • Class "Microgenomatia"
    • Clade GWA2-44-7
    • "Chazhemtobacteriales" Pallen, Rodriguez-R & Alikhan 2022 [UBA1400]
    • "Curtissbacterales"
    • "Daviesbacterales"
    • "Gottesmanbacterales"
    • "Levybacterales"
    • "Roizmanbacterales"
    • "Shapirobacterales"
    • "Woykebacterales" (RIF34)
  • Class "Absconditabacteria"
    • "Absconditabacterales" (sic)Yakimov et al. 2022 (SR1)
    • "Candidatus Altimarinus" Rinke et al. 2013 {BD1-5: UBA6164} (GN02)
  • Class "Gracilibacteria"
    • "Abawacabacterales" (RIF46)
    • "Fertabacterales" (DOLZORAL124_38_8; "Fallacibacteriota")
    • "Peregrinibacterales" (PER)
    • "Peribacterales" Anantharaman et al. 2016
  • Class "Berkelbacteria" (ACD58)
  • Class "Kazanbacteria" (Kazan)
  • Class "Howlettbacteria" (CPR2)
  • Class "Saccharimonadia" corrig. Lemos et al. 2019 (TM7)
    • "Saccharimonadales" corrig. Lemos et al. 2019 ex Chuvochina et al. 2023
  • Class "Andersenbacteria" (RIF9)
  • Class "Doudnabacteria" (SM2F11)
  • Class "Torokbacteria" (GCA-2792135)
  • Class "ABY1"
    •  ?"Brownbacterales"
    • "Buchananbacterales" (RIF37)
    • "Falkowbacterales"
    • "Jacksonbacterales" (RIF38)
    • "Kerfeldbacterales" (RIF4)
    • "Komeilibacterales" (RIF6)
    • "Kuenenbacterales"
    • "Magasanikbacterales"
    • "Moisslbacterales" [UBA2591]
    • "Uhrbacterales"
    • "Veblenbacterales" (RIF39)
  • Class "Paceibacteria" Chuvochina et al. 2023
    • "Azambacterales"
    • Clade UBA6257
    • "Giovannonibacterales" (UBA11713)
    •  ?"Montesolbacterales"
    • "Moranbacterales" (OD1-i)
    • "Niyogibacterales" (RIF11; HO2-45-28)
    • "Paceibacterales" Chuvochina et al. 2023
    • "Parcunitrobacterales" Castelle et al. 2017
    • "Portnoybacterales" (RIF22)
    • "Ryanbacterales" (RIF10)
    • "Spechtbacterales" (RIF19)
    • "Sungbacterales" (RIF17)
    • "Tagabacterales" (RIF12)
    • "Terrybacterales" (RIF13)
    • "Yanofskybacterales" (2-02-FULL-40-12)

Clade

Clade "Fusobacterida"

Phylum "Muiribacteriota"

  • Class "Muiribacteriia" corrig. Chuvochina et al. 2023
    • "Muiribacteriales" corrig. Chuvochina et al. 2023

Phylum "Rifleibacteriota"

  • Class "Ozemibacteria" corrig. Kadnikov et al. 2018 (RIF32/ACD39)
    • "Ozemibacterales" corrig. Kadnikov et al. 2018

Phylum "Macinerneyibacteriota"

  • Class "Macinerneyibacteriia" corrig. Yadav et al. 2020
    • "Macinerneyibacteriales" corrig. Yadav et al. 2020

Phylum Fusobacteriota

  • Class Fusobacteriia corrig. Staley & Whitman 2012
    • Fusobacterales Staley & Whitman 2012 ("Bactepneumoniales")

Clade

Phylum "Bipolaricaulota"

  • Class "Bipolaricaulia" Chuvochina et al. 2023
    • "Bipolaricaulales" Chuvochina et al. 2023 (KB1 group, OP1)
    • "Fraserbacterales" [GTDB tag: RIF31; RBG-16-55-9]

Phylum Deinococcota

Kingdom Pseudomonadati

Summarize
Perspective

Clade

Phylum "Goldiibacteriota"

  • "Candidatus Cellulosimonas" Doud et al. 2020

Phylum Elusimicrobiota

  • Class "Elusimicrobiia" Oren, Parte & Garrity 2016 ex Cavalier-Smith 2020 (TG1)
    • Elusimicrobiales Geissinger et al. 2010
    • "Obscuribacteriales" Uzun et al. 2023
  • Class "Endomicrobiia" Stingl et al. 2018
    • "Endomicrobiales" Zheng et al. 2018

Phylum "Aerophobota"

  • Class "Aerophobia" Chuvochina et al. 2023 (CD12)
    • "Aerophobales" Chuvochina et al. 2023

Phylum "Auribacterota"

Phylogeny of "Auribacterota"[9][10][11]
"Tritonobacteria"

"Tritonobacterales"

"Erginobacteria"

"Erginobacterales"

"Ancaeobacteria"

"Ancaeobacterales"

"Auribacteria"

"Auribacterales"

JACPWU01

"Theseobacterales"

  • Class "Ancaeobacteria" Williams et al. 2022 [JAKLEM01]
    • "Ancaeobacterales" Williams et al. 2022
  • Class "Auribacteria" Williams et al. 2022 [SURF-26]
    • "Auribacterales" Williams et al. 2022
  • Class "Erginobacteria" Williams et al. 2022 [PUNC01]
    • "Erginobacterales" Williams et al. 2022
  • Class JACPWU01
    • "Theseobacterales" Williams et al. 2022
  • Class "Tritonobacteria" Williams et al. 2022 [UBA1439]
    • "Tritonobacterales" Williams et al. 2022

Phylum "Omnitrophota"

Phylogeny of Omnitrophota[9][10][11]
"Omnitrophia"

"Omnitrophales"

"Velamenicoccia"

"Aquiviventales"

"Gorgyraeales"

"Pluralincolimonadales"

JABMRG01

"Taenaricolales"

"Aquitaenarimonadales"

"Tantalellales"

"Kappaeales"

"Velesiimonadales"

"Kaelpiales"

"Duberdicusellales"

"Ghiorseimicrobiales"

"Gygaeellales"

"Velamenicoccales"

"Zapsychrales"

  • Class "Omnitrophia" (OP3)
    • "Omnitrophales"
  • Class "Velamenicoccia" Pallen, Rodriguez-R & Alikhan 2022 [Koll11]
    • "Aquitaenarimonadales" Seymour et al. 2022
    • "Aquiviventales" Seymour et al. 2022
    • "Duberdicusellales" Seymour et al. 2022
    • "Ghiorseimicrobiales" Seymour et al. 2022
    • "Gorgyraeales" Seymour et al. 2023 [UBA10183]
    • "Gygaeellales" Seymour et al. 2023 [GIF10]
    • "Candidatus Orphnella" Williams et al. 2021 {JABMRG01: JABMRG01}
    • "Kaelpiales" Seymour et al. 2022 [4484-49]
    • "Kappaeales" Seymour et al. 2022
    • "Pluralincolimonadales" Seymour et al. 2022
    • "Taenaricolales" Seymour et al. 2022
    • "Tantalellales" Seymour et al. 2022 [SKK-01]
    • "Velamenicoccales" Pallen, Rodriguez-R & Alikhan 2022 [UBA1572]
    • "Velesiimonadales" Seymour et al. 2022
    • "Zapsychrales" Seymour et al. 2022

Clade Spirochaetobacteriobiontes

Phylum "Babelota"

  • Class "Babeliae" (sic) Yeoh et al. 2016 (TM6)
    • "Babelales" corrig. Yeoh et al. 2016

Phylum Spirochaetota

Phylogeny of Spirochaetota[9][10][11]
"Leptospirae"

Turneriellales

Leptospirales

Leptospiria
"Euspirochaetae"
Brevinematia

Brevinematales

Brachyspiria

Brachyspirales

"Exilispiria"

"Exilispirales"

Spirochaetia

Borreliales

"Entomospirales"

DSM-17781

Spirochaetales E

Spirochaetales A

"Salinispirales"

"Marispirochaetales"

"Sediminispirochaetales"

Sphaerochaetales

Treponematales

  • Class Leptospiria Chuvochina et al. 2024
    • Leptospirales corrig. Gupta et al. 2014
    • Turneriellales Chuvochina et al. 2024
  • Class Brevinematia Chuvochina et al. 2024
  • Class Brachyspiria Chuvochina et al. 2024
  • Class "Exilispiria" Pallen, Rodriguez-R & Alikhan 2022
    • "Exilispirales" Pallen, Rodriguez-R & Alikhan 2022
  • Class Spirochaetia Paster 2020
    •  ?Spirochaetales Buchanan 1917
    • Borreliales Chuvochina et al. 2024
    • Spirochaeta cellobiosiphila Breznak & Warnecke 2008 {DSM-17781: DSM-17781}
    • "Entomospirales" Pallen, Rodriguez-R & Alikhan 2022 [WRBN01]
    • "Marispirochaetales" Pallen, Rodriguez-R & Alikhan 2022 [JC444]
    • "Salinispirales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-27196]
    • "Sediminispirochaetales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-16054]
    • Sphaerochaetales Chuvochina et al. 2024
    • Spirochaeta thermophila Aksenova et al. 1992 {Spirochaetales_A}
    • Spirochaetales_E
    • Treponematales Chuvochina et al. 2024

Clade Planctobacteria

Phylum Planctomycetota

Phylogeny of Planctomycetota[9][10][11]

Phylum Chlamydiota

  • Class Chlamydiia Horn 2011
    • "Similichlamydiales" Pallen, Rodriguez-R & Alikhan 2022 [Hat2]
    • Chlamydiales Storz & Page 1971 em. Everett et al. 1999 (Parachlamydiales, "Anoxychlamydiales", "Simkaniales")

Phylum Verrucomicrobiota

Phylogeny of Verrucomicrobiota[9][10][11]
Lentisphaeria

Lentisphaerales

Oligosphaerales

Victivallales

Kiritimatiellae

"Spyradenecales"

Kiritimatiellales

Verrucomicrobiia

Opitutales

Limisphaerales

"Methylacidiphilales"

Terrimicrobiales

Verrucomicrobiales

  • Class Lentisphaeria Cho et al. 2004
    • Lentisphaerales Cho et al. 2004
    • Oligosphaerales Qiu et al. 2013
    • Victivallales Cho et al. 2004
  • Class Kiritimatiellae Spring et al. 2017
    • Kiritimatiellales Spring et al. 2017 [incl. Tichowtungiales]
    • "Spyradenecales" Pallen, Rodriguez-R & Alikhan 2022 [RFP12]
  • Class Verrucomicrobiia corrig. Hedlund, Gosink & Staley 1998
    • Limisphaerales Podosokorskaya et al. 2023
    • "Methylacidiphilales" Op den Camp 2009 ["Pedosphaerales"]
    • Opitutales Choo et al. 2007 (Puniceicoccales)
    • Terrimicrobiales García-López et al. 2020 ("Chthoniobacterales")
    • Verrucomicrobiales Ward-Rainey et al. 1996 em. Yoon et al. 2008

Clade

Phylum "Saltatorellota"

  • Class "Saltatorellae" Wiegand et al. 2019
    •  ?"Saltatorellales" Wiegand et al. 2019

Phylum "Hinthialibacterota"

  • Class "Hinthialibacteria" Williams et al. 2022
    • "Hinthialibacterales" Williams et al. 2022 (OLB16)

Phylum "Sumerlaeota"

  • Class "Sumerlaeia" Kadnikov et al. 2018
    • "Sumerlaeales" Kadnikov et al. 2018

Phylum "Poribacteriota"

  • Class ?"Entoporibacteria" Podell et al. 2019
  • Class ?"Pelagiporibacteria" Podell et al. 2019

Phylum "Hydrogenedentota"

  • Class "Hydrogenedentia" Chuvochina et al. 2023 (NKB19)
    • "Hydrogenedentales" corrig. Chuvochina et al. 2023

Clade FCB group

Phylum "Heilongiota"

  • Class "Heilongiia" corrig. Zhang et al. 2022
    •  ?"Heilongiales" Zhang et al. 2022

Phylum "Fidelibacterota"

  •  ?"Candidatus Neomarinimicrobium" Rinke et al. 2013 corrig. Oren et al. 2020 (Candidate phylum SAR406; candidate phylum Marine Group A)
  • Class Fidelibacteria Katayama et al. 2024
    •  ?Fidelibacterales Katayama et al. 2024

Phylum "Tianyaibacteriota"

  •  ?"Candidatus Tianyaibacterium" corrig. Cui et al. 2021

Phylum "Fermentibacterota"

  • Class "Fermentibacteria" Kirkegaard 2016 ("Aegiribacteria")
    • "Fermentibacterales" Kirkegaard 2016 (Hyd24-12)

Phylum "Latescibacterota"

  • Class "Handelsmanbacteria" (RIF27)
  • Class "Latescibacteria" Chuvochina et al. 2023
    • "Latescibacterales" Chuvochina et al. 2023 (WS3)

Phylum "Effluvivivacota"

  • Family "Effluvivivacaceae" corrig. Su et al. 2024 (VGIX01)

Phylum "Krumholzibacteriota"

  • Class "Krumholzibacteriia" corrig. Youssef et al. 2019
    • "Delphibacterales" (DOLZORAL124_64_63; LZORAL124-64-63)
    • "Krumholzibacteriales" Youssef et al. 2019 (UBP1)

Phylum Gemmatimonadota

Phylogeny of Gemmatimonadota[9][10][11]

"Glassbacteria"

Gemmatimonadetes

Gemmatimonadales

Longimicrobiales

"Palaucibacterales"

  • Class "Glassbacteria" (RIF5)
  • Class Gemmatimonadetes Zhang et al. 2003
    • Gemmatimonadales Zhang et al. 2003
    • Longimicrobiales Pascual et al. 2016
    • "Palaucibacterales" Aldeguer-Riquelme, Antón & Santos 2022 [PAUC43f]

Phylum "Hydrothermota"

Phylogeny of Hydrothermota[9][10][11]

"Stahliibacteriia"

"Hydrothermia"

"Caldipriscales"

"Hydrothermales"

  • Class "Stahliibacteriia" (UBA3073)
  • Class "Hydrothermia" Chuvochina et al. 2019 ex Chuvochina et al. 2023
    • "Hydrothermales" Chuvochina et al. 2019 ex Chuvochina et al. 2023 (EM3)
    • "Caldipriscales" Pallen, Rodriguez-R & Alikhan 2022 [LBFQ01]

Phylum "Cloacimonadota"

  • Class "Cloacimonadia" Williams et al. 2021 ex Chuvochina et al. 2023
    • "Candidatus Celaenobacter" Williams et al. 2021 {JGIOTU-2: JGIOTU-2}
    • "Cloacimonadales" Williams et al. 2021 ex Chuvochina et al. 2023 (WWE1)

Phylum Fibrobacterota

Phylogeny of Fibrobacterota[9][10][11]

"Raymondiibacteriia"

Fibrobacteria

Fibrobacterales

Phylum "Electryoneota"

  • Class "Electryoneia" Williams et al. 2022
    • Electryoneales Williams et al. 2022
  • Class AABM5-125-24
    • Hatepunaeales Williams et al. 2022
  • Class "Tariuqbacteria" Vigneron, Vincent & Lovejoy 2023
    •  ?Tariuqbacterales Vigneron, Vincent & Lovejoy 2023

Phylum "Marinisomatota"

  • Class "Marinisomatia"
    • "Marinisomatales" (SAR406)

Phylum Calditrichota

  • Class Calditrichia Kublanov et al. 2022

Phylum "Cosmopoliota"

  • Class "Cosmopolitia" (sic) Zhang et al. 2023
    • "Cosmopoliales" Zhang et al. 2023 (SAR406)

Phylum "Zhuqueibacterota"

Phylogeny of "Zhuqueibacterota"[9][10][11]

"Sulfurfontimicrobiaceae" {JAFGMA01}

"Thermofontimicrobiales"

"Oceanimicrobiales"

"Zhuqueibacterales"

"Oleimicrobiales"

"Residuimicrobiales"

  • Class "Zhuqueibacteria" Lian et al. 2024 [KSB1: UBA2214]
    • "Oceanimicrobiales" Lian et al. 2024 [CR04bin15]
    • "Oleimicrobiales" Lian et al. 2024 [JACIZP01]
    • "Residuimicrobiales" Lian et al. 2024 [UBA2214]
    • "Sulfurfontimicrobiaceae" Lian et al. 2024 {JAFGMA01}
    • "Thermofontimicrobiales" Lian et al. 2024 [AABM5-25-91]
    • "Zhuqueibacterales" Lian et al. 2024 [DRLW01]

Phylum Bacteroidota

Phylogeny of Bacteroidota[9][10][11]

Clade Proteobacteria

Phylum "Canglongiota"

  • Class "Canglongiliia" Zhang et al. 2022
    •  ?"Canglongiales" Zhang et al. 2022

Phylum Acidobacteriota

Phylogeny of Acidobacteriota[9][10][11]

"Fischerbacteria"

"Guanabaribacteriia"

"Guanabaribacteriales"

"Aminicenantia"

"Aminicenantales"

Phylum "Moduliflexota"

  • Class "Moduliflexia" Sekiguchi et al. 2015 (KSB3)
    • "Moduliflexales" Sekiguchi et al. 2015

Phylum "Methylomirabilota"

  • Class "Methylomirabilia" Chuvochina et al. 2023
    • "Methylomirabilales" Cabrol et al. 2020 ex Chuvochina et al. 2023
    • "Rokubacteriales" (CSP1-6)

Phylum "Tectimicrobiota"

  • Class "Entotheonellia" Chuvochina et al. 2023
    • "Entotheonellales" Schmidt et al. 2000 ex Chuvochina et al. 2023

Phylum Nitrospinota

  • Class Nitrospinia Lucker et al. 2022
    • Nitrospinales Lucker et al. 2022

Phylum Nitrospirota

Phylogeny of Nitrospirota[9][10][11]
Thermodesulfovibrionia

Thermodesulfovibrionales

Nitrospiria

"Troglogloeales"

Nitrospirales

  • Class Thermodesulfovibrionia Umezawa et al. 2023
    •  ?"Mariimomonadales" Yoon et al. 2023
    • Thermodesulfovibrionales Umezawa et al. 2023 ["Magnetobacteriales"]
  • Class Nitrospiria Garrity & Holt 2022
    • Nitrospirales Garrity & Holt 2022
    • "Troglogloeales" Yu et al. 2022 ["Manganitrophales"]

Phylum SAR324

  • Class Lambdaproteobacteria Anantharaman et al. 2016 (RIF24)

Phylum Bdellovibrionota

Phylogeny of Bdellovibrionota[9][10][11]

Phylum "Binatota"

  • Class "Binatia" Chuvochina et al. 2019 ex Chuvochina et al. 2023
    • "Binatales" Chuvochina et al. 2019 ex Chuvochina et al. 2023

Phylum "Deferrisomatota"

Phylum "Lernaellota"

  • Class "Lernaellia" Williams et al. 2022 [FEN-1099]
    • "Alcyoniellaceae" Williams et al. 2022 {JAVCCG01}
    • "Lernaellales" Williams et al. 2022

Phylum Myxococcota

Phylogeny of Myxococcota[9][10][11]
"Kuafubacteriia"

"Kuafubacteriales"

Myxococcia

Myxococcales

Bradymonadia

Bradymonadales

Polyangia

Haliangiales

Nannocystales

Polyangiales

  • Class "Kuafubacteriia" corrig. Li et al. 2023
    • "Kuafubacteriales" Li et al. 2023 [WYAZ01: GCA_016703535]
  • Class Myxococcia Waite et al. 2020
    • Myxococcales Tchan, Pochon & Prévot 1948 [Archangiales; "Angiobacteriales"; "Angiococcales"] (fruiting gliding bacteria)
  • Class Bradymonadia corrig. Chuvochina et al. 2024
    • Bradymonadales Wang et al. 2015
  • Class Polyangiia corrig. Waite et al. 2020
    • Haliangiales Waite et al. 2020
    • Nannocystales (Reichenbach 2007) Waite et al. 2020
    • Polyangiales Tchan, Pochon & Prevot 1948 [Myxobacterales]

Phylum "Nitrosediminicolota"

  •  ?Candidatus "Nitrosediminicola" Zhao, Jorgensen & Babbin 2024

Phylum "Deferrimicrobiota"

  • Class "Deferrimicrobiia" corrig. Begmatov et al. 2022
    • Deferrimicrobiales Begmatov et al. 2022

Phylum Thermodesulfobacteriota

Phylogeny of Thermodesulfobacteriota[9][10][11]
"Zymogeniia"

"Zymogeniales"

"Anaeroferrophilia"

"Anaeroferrophilales"

Dissulfuribacteria

Dissulfuribacterales

"Thermodesulfobacteriia"

Thermodesulfobacteriales

Desulfobulbia

Desulfobulbales

"Desulfofervidia"

"Desulfofervidales"

"Desulfatiglandia"

Desulfatiglandales

Desulfobaccia

Desulfobaccales

Desulfarculia

"Adiutricales"

Desulfarculales

Desulfobacteria

Desulfobacterales

  • Class "Zymogeniia" corrig. Murphy et al. 2021
    • "Zymogeniales" Murphy et al. 2021
  • Class "Anaeroferrophilia" corrig. Murphy et al. 2021
    • "Anaeroferrophilales" Murphy et al. 2021 ["Tharpellales"]
  • Class Desulfuromonadia Waite et al. 2020
  • Class Desulfomonilia Waite et al. 2020
  • Class Syntrophia Waite et al. 2020
  • Class Dissulfuribacteria Waite et al. 2020
    • Dissulfuribacterales Waite et al. 2020
  • Class Thermodesulfobacteriia corrig. Hatchikian, Ollivier & Garcia 2002
  • Class Desulfobulbia Waite et al. 2020
    • Desulfobulbales Waite et al. 2020
  • Class "Desulfofervidia" Waite et al. 2020
    • "Desulfofervidales" Waite et al. 2020
  • Class "Desulfatiglandia" Pallen, Rodriguez-R & Alikhan 2022 [DSM-4660]
    • Desulfatiglandales Waite et al. 2020
  • Class Desulfovibrionia Waite et al. 2020
  • Class Desulfobaccia Waite et al. 2020
    • Desulfobaccales Waite et al. 2020
  • Class Desulfarculia Waite et al. 2020
    • "Adiutricales" Waite et al. 2020
    • Desulfarculales corrig. Kuever, Rainey & Widdel 2006
  • Class Syntrophobacteria Waite et al. 2020
  • Class Desulfobacteria Waite et al. 2020

Phylum Desulfobacterota G

  • Class Syntrophorhabdia Waite et al. 2020
    • Syntrophorhabdales Waite et al. 2020

Phylum "Dadaibacteriota"

  • Class "Dadabacteria" (sic) Hug et al. 2016 [CSP1-2]
    • "Nemesobacterales" Gavriilidou et al. 2023

Phylum "Acidulodesulfobacteriota"

  • Class "Acidulodesulfobacteriia" (sic) Pallen, Rodriguez-R & Alikhan 2022 [SZUA-79]
    • "Acidulidesulfobacterales" corrig. Tan et al. 2019

Phylum Chrysiogenota

Phylum Deferribacterota

Phylum Thermosulfidibacterota

  • Class Thermosulfidibacteria Cavalier-Smith 2020 ex Chuvochina et al. 2024
    • Thermosulfidibacterales Cavalier-Smith 2020 ex Chuvochina et al. 2024

Phylum Aquificota

Phylogeny of Aquificota[9][10][11]
Desulfurobacteriia

Desulfurobacteriales

Aquificia

Hydrogenothermales

Aquificales

  • Class Desulfurobacteriia Chuvochina et al. 2024
    • Desulfurobacteriales Gupta & Lali 2014
  • Class Aquificia corrig. Reysenbach 2002
    • Aquificales Reysenbach 2002
    • Hydrogenothermales Chuvochina et al. 2024

Phylum "Calescibacteriota"

  • Class "Calescibacteriia" Chuvochina et al. 2023 (EM19)
    • "Calescibacteriales" Chuvochina et al. 2023

Phylum Campylobacterota_A

Phylum Campylobacterota

Phylogeny of Campylobacterota[9][10][11]

Phylum "Leptospirillaeota"

  • Class "Leptospirillia" Chuvochina et al. 2023
    • "Leptospirillales" Chuvochina et al. 2023

Phylum Pseudomonadota

Phylogeny of Pseudomonadota[9][10][11]
"Caulobacteria"

Holosporales A

Rickettsiales A

Holosporales

Paracaedibacterales

"Rickettsiidae"

"Pelagibacterales"

"Enterousiales"

Rickettsiales

"Caulobacteridae" cont'd

"Mariprofundia"

Mariprofundales

Magnetococcia

Magnetococcales

"Pseudomonadia"
"Neisseriidae"

"Tethybacterales"

Burkholderiales

"Pseudomonadidae"

"Thioglobales"

"Comchoanobacterales"

"Magnimaribacterales"

Pseudomonadales A

Cardiobacteriales

"Chromatiae"

"Enterobacteriae"

  • Class "Anaeropigmentatia" corrig. Murphy et al. 2021
    •  ?Anaeropigmentatales corrig. Murphy et al. 2021
  • Class Caulobacteria" Oren, Parte & Garrity 2016 ex Cavalier-Smith 2020
    •  ?"Futianiales" Liu et al. 2022
    •  ?"Methylospongiales" Podell et al. 2020
    • Holosporales_A
    • Holosporales Szokoli et al. 2016
    • "Paracaedibacterales" Chuvochina et al. 2023
    • Rickettsiales_A
    • Sublass "Rickettsiidae" corrig. Ferla et al. 2013
      • "Enterousiales" Pallen, Rodriguez-R & Alikhan 2022 {Rs-D84}
      • "Pelagibacterales" Grote et al. 2012
      • Rickettsiales Gieszczykiewicz 1939 emend. Dumler et al. 2001
Phylogeny of "Caulobacteridae"[9][10][11]

"Scatocolales"

"Caedimonadales"

"Micavibrionales"

"Inquilinales"

Azospirillales

Elsterales

Rhodospirillales

"Marivibrionales"

Kiloniellales

Zavarziniales

Ferrovibrionales

Minwuiales

Sneathiellales

"Planktothermales"

Tistrellales

Geminicoccales

Dongiales

"Tagaeales"

"Stellales"

Reyranellales

Acetobacterales

Oceanibaculales

Thalassobaculales

Puniceispirillales

Rhodospirillales A

Phylogeny of "Pseudomonadidae"[9][10][11]
"Chromatiae"

Halothiobacillales

Thiomicrospirales

Thiotrichales

DSM-5130

Ectothiorhodospirales

Granulosicoccales

"Thiopontiales"

Methylococcales

Methylohalomonadales

Beggiatoales

Methylohalomonadales

Beggiatoales

Nitrosococcales

"Tenderiales"

"Reidiellales"

"Sulfuriflexales"

"Thiohalophilales"

JG42

Thiohalomonadales

"Thiogranales"

Thiohalobacterales

"Thioalbales"

"Competibacterales"

"Inmiraniales"

"Macondimonadales"

Natronospirales

Halofilales

Thiohalospirales

Nitrococcales

Chromatiales

Immundisolibacterales

Acidiferrobacterales

Arenicellales

Acidithiobacillales

Thiohalorhabdales

Nevskiales

Steroidobacterales

"Rariloculales"

UBA11654

"Foliamicales"

Woeseiales

"Porifericomitales"

"Porisulfidales"

Xanthomonadales

"Enterobacteriae"

Francisellales

Berkiellales

Coxiellales

"Aquicellales"

Diplorickettsiales

Legionellales

"Pelagibaculales"

Piscirickettsiales

Enterobacterales

Pseudomonadales

    • Subclass "Pseudomonadidae" Cavalier-Smith 2020
      • Acidiferrobacterales Kojima, Shinohara & Fukui 2015
      • Acidithiobacillales Garrity, Bell & Lilburn 2005
      • "Aquicellales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-16500]
      • Arenicellales Teramoto, Yagyu & Nishijima 2015
      • Beggiatoales Buchanan 1957
      • "Berkiellales" Chuvochina et al. 2023
      • Cardiobacteriales Garrity, Bell & Lilburn 2005
      • Chromatiales Imhoff 2005
      • "Comchoanobacterales" Needham et al. 2022
      • "Competibacterales" Chuvochina et al. 2023
      • Coxiellales Chuvochina et al. 2024
      • Diplorickettsiales" Chuvochina et al. 2024
      • Acidihalobacteraceae Chuvochina et al. 2024 {DSM-5130}
      • Ectothiorhodospirales Chuvochina et al. 2024
      • Enterobacterales Adeolu et al. 2016 ("Bacteriales"; Orbales,"Johnevansiales"; "Aerobacterales"; Aeromonadales; Alteromonadales; Kangiellales; Pasteurellales; "Vibrionales")
      • "Foliamicales" Nguyen et al. 2023
      • Francisellales Chuvochina et al. 2024
      • Granulosicoccales Chuvochina et al. 2024
      • "Halofilales" Pallen, Rodriguez-R & Alikhan 2022 [XJ16]
      • Halothiobacillales Chuvochina et al. 2024
      • Immundisolibacterales Corteselli, Aitken & Singleton 2017
      • "Inmiraniales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-100275]
      • Sulfurivermis Kojima, Watanabe & Fukui 2017 {JG42: JG42}
      • Legionellales Garrity, Bell & Lilburn 2005
      • "Macondimonadales" Pallen, Rodriguez-R & Alikhan 2022 [UBA5335]
      • "Magnimaribacterales" Ramfelt et al. 2024 [SAR86: SAR156]
      • Methylococcales Bowman 2005
      • Methylohalomonadales Sorokin & Merkel 2023
      • Natronospirales Sorokin et al. 2025 {SLND01: SLND01}
      • Nevskiales Naushad et al. 2015 ("Salinisphaerales")
      • Nitrococcales Chuvochina et al. 2024
      • Nitrosococcales Chuvochina et al. 2024
      • "Pelagibaculales" Pallen, Rodriguez-R & Alikhan 2022 [HP12]
      • Piscirickettsiales Chuvochina et al. 2024
      • "Porifericomitales" Nguyen et al. 2023
      • "Poriferisulfidales" Nguyen et al. 2023 ex Chuvochina et al. 2023
      • Pseudomonadales Orla-Jensen 1921 (Cellvibrionales; Moraxellales; Oceanospirillales)
      • "Rariloculales" Nguyen et al. 2022
      • "Reidiellales" Pallen, Rodriguez-R & Alikhan 2022 [GCF-013343005]
      • "Riflewellaceae" Zhou et al. 2020 {UBA4486}
      • Steroidobacterales Chuvochina et al. 2024
      • "Sulfuriflexales" Pallen, Rodriguez-R & Alikhan 2022 [AKS1]
      • "Taraoceanobacteraceae" Zhou et al. 2020 {UBA11654}
      • "Tenderiales" Chuvochina et al. 2023
      • "Thioalbales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-26407]
      • "Thioglobales" Pallen, Rodriguez-R & Alikhan 2022 [PS1]
      • "Thiogranales" Pallen, Rodriguez-R & Alikhan 2022 [DSM-19610]
      • Thiohalobacterales Sorokin & Merkel 2023
      • Thiohalomonadales Sorokin & Merkel 2023
      • "Thiohalophilales" Pallen, Rodriguez-R & Alikhan 2022 {UBA6429}
      • Thiohalorhabdales Sorokin & Merkel 2023
      • Thiohalospirales Sorokin & Merkel 2023
      • Thiomicrospirales Chuvochina et al. 2024
      • "Thiopontiales" Pallen, Rodriguez-R & Alikhan 2022 [GCF-002020875]
      • Thiotrichales Garrity, Bell & Lilburn 2005
      • Woeseiales Chuvochina et al. 2024
      • Xanthomonadales Saddler & Bradbury 2005 non Chadefaud 1950a (Lysobacterales)

List of Candidate Phyla

  • "Qinglongiota" Zhang et al. 2022
  • "Salinosulfoleibacteria" Tazi et al. 2006
  • "Teskebacteria" Dojka 1998 (WS1)

See also

References

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