叉管藻科（學名：Dichotomosiphonaceae）為羽藻目的一個科。此科的模式屬為叉管藻屬(Dichotomosiphon)。
下級分類
本科包括以下屬：[1]
- 絨扇藻屬 Avrainvillea Decaisne, 1842
- Cladocephalus M.A.Howe, 1905
- 叉管藻屬 Dichotomosiphon A.Ernst, 1902
參考文獻
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