芽孢桿菌屬（學名：Bacillus）是芽孢桿菌科的一屬細菌，屬於革蘭氏陽性菌，包括模式生物枯草芽孢桿菌和著名的致病菌炭疽桿菌等。此屬細菌中有專性需氧菌或兼性厭氧菌，他們遍佈於各種環境，有些獨立存在亦有些會寄生於其他生物。在不適合生存的情況下，此屬細菌可以轉化為內生孢子以進入休眠狀態，此休眠狀態可以持續很久。
Quick Facts 芽孢桿菌屬, 科學分類 ...
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在芽孢桿菌屬中，其中枯草桿菌可以作為科學研究用的模式生物，還有可致病的炭疽桿菌和蠟樣芽孢桿菌。
| 芽孢桿菌屬的系統發育
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| 根據[2]，此為芽孢桿菌屬的系統發育。
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本屬包括以下物種：[3]
- Bacillus abyssalis You et al., 2013，異名
- 老鼠簕芽胞桿菌 Bacillus acanthi Ma et al., 2018，異名
- Bacillus acidiceler Peak et al., 2007，異名
- Bacillus acidicola Albert et al., 2005
- Bacillus acidinfaciens Sun et al., 2019，異名
- Bacillus acidiproducens Jung et al., 2009，異名
- Bacillus aciditolerans Ding et al., 2019，異名
- Bacillus acidocaldarius Darland and Brock 1971，異名
- Bacillus acidoterrestris Deinhard et al., 1988，異名
- Bacillus agaradhaerens Nielsen et al., 1995，異名
- Bacillus agri (ex Laubach and Rice 1916) Nakamura 1993，異名
- Bacillus aidingensis Xue et al., 2008，異名
- Bacillus akibai Nogi et al., 2005，異名
- 白色芽胞桿菌 Bacillus albus Liu et al., 2017
- Bacillus alcalophilus Vedder 1934，異名
- Bacillus algicola Ivanova et al., 2004，異名
- Bacillus alginolyticus Nakamura 1987，異名
- Bacillus alkalicellulosilyticus Liu et al. 2022
- Bacillus alkalicola Zhai et al. 2022
- Bacillus alkalidiazotrophicus Sorokin et al., 2008，異名
- Bacillus alkalilacus Singh et al., 2018，異名
- Bacillus alkalinitrilicus Sorokin et al., 2009，異名
- Bacillus alkalisediminis Borsodi et al., 2011，異名
- Bacillus alkalitelluris Lee et al., 2008，異名
- Bacillus alkalitolerans Liu et al., 2018，異名
- Bacillus altitudinis Shivaji et al., 2006
- Bacillus alveayuensis Bae et al., 2005
- Bacillus alvei Cheshire and Cheyne 1885，異名
- 解澱粉芽孢桿菌 Bacillus amyloliquefaciens (ex Fukumoto 1943) Priest et al., 1987
- Bacillus amylolyticus (ex Choukévitch 1911) Nakamura 1984，異名
- Bacillus andreesenii Kosowski et al., 2014，異名
- Bacillus aneurinilyticus corrig. (ex Kimura and Aoyama 1952) Shida et al., 1994，異名
- Bacillus aneurinolyticus (ex Kimura and Aoyama 1952) Shida et al., 1994，拼寫錯誤
- 炭疽芽孢桿菌 Bacillus anthracis Cohn, 1872，也稱炭疽桿菌
- Bacillus antri Rao et al., 2019，異名
- Bacillus aquiflavi Xie et al., 2020[4]
- 海水芽孢桿菌 Bacillus aquimaris Yoon et al., 2003，異名
- Bacillus arachidis Chen et al., 2023[5]
- Bacillus arenosi Heyrman et al., 2005，異名
- Bacillus arseniciselenatis Switzer Blum et al., 2001，也拼作Bacillus arsenicoselenatis
- Bacillus arsenicus Shivaji et al., 2005，異名
- Bacillus arvi Heyrman et al., 2005，異名
- 阿耶波多氏芽胞桿菌 Bacillus aryabhattai Shivaji et al., 2009，異名
- 朝日芽胞桿菌 Bacillus asahii Yumoto et al., 2004，異名
- 萎縮芽孢桿菌 Bacillus atrophaeus Nakamura 1989
- Bacillus aurantiacus Borsodi et al., 2008，異名
- Bacillus australimaris Liu et al., 2016
- Bacillus axarquiensis Ruiz-García et al., 2005，異名
- Bacillus azotofixans Seldin et al., 1984，異名
- Bacillus azotoformans (ex Pichinoty et al., 1976) Pichinoty et al., 1983，異名
- Bacillus badius Batchelor 1919
- Bacillus barbaricus Täubel et al., 2003，異名
- 巴塞爾芽孢桿菌 Bacillus basilensis Muigg et al. 2024[6]
- 巴達維亞芽孢桿菌 Bacillus bataviensis Heyrman et al., 2004，為Neobacillus bataviensis (Heyrman et al. 2004) Patel and Gupta 2020異名
- 北京芽孢桿菌 Bacillus beijingensis Qiu et al., 2009，為Bhargavaea beijingensis (Qiu et al. 2009) Verma et al. 2012的異名
- Bacillus benzoevorans Pichinoty et al., 1987
- 白令海芽孢桿菌 Bacillus beringensis Yu et al., 2012[7]
- Bacillus berkeleyi Nedashkovskaya et al., 2012，異名
- Bacillus beveridgei Baesman et al., 2010，異名
- 兵馬俑芽孢桿菌 Bacillus bingmayongensis Liu et al. 2014[8]
- Bacillus bogoriensis Vargas et al., 2005，為Alkalihalobacterium bogoriense (Vargas et al. 2005) Joshi et al. 2022的異名
- Bacillus boroniphilus Ahmed et al., 2007，為Mesobacillus boroniphilus (Ahmed et al. 2007) Patel and Gupta 2020的異名
- Bacillus borstelensis (ex Porter 1940) Shida et al., 1995，為Brevibacillus borstelensis (Shida et al. 1995 ex Porter 1940) Shida et al. 1996的異名
- Bacillus brevis Migula 1900，為Brevibacillus brevis (Migula 1900) Shida et al. 1996的異名
- Bacillus butanolivorans Kuisiene et al., 2008，異名
- Bacillus cabrialesii de Los Santos Villalobos et al., 2019
- Bacillus caeni Mo et al., 2020，為Pseudalkalibacillus caeni (Mo et al. 2020) Joshi et al. 2022的異名
- Bacillus camelliae Niu et al., 2018，異名
- Bacillus campisalis Kumar et al., 2015，異名
- Bacillus canaveralius Newcombe et al., 2009
- Bacillus capparidis Wang et al., 2017
- Bacillus carboniphilus Fujita et al., 1996
- Bacillus caseinilyticus Vishnuvardhan Reddy et al., 2015，異名
- Bacillus catenulatus Sultanpuram et al., 2018，異名
- Bacillus cavernae Feng et al., 2016，異名
- Bacillus cecembensis Reddy et al., 2008，異名
- Bacillus cellulosilyticus Nogi et al., 2005，異名
- Bacillus centrosporus (ex Ford 1916) Nakamura 1993，異名
- 蠟樣芽孢桿菌 Bacillus cereus Frankland and Frankland 1887
- Bacillus chagannorensis Carrasco et al., 2007，異名
- Bacillus chitinolyticus Kuroshima et al., 1996，異名
- Bacillus chondroitinus Nakamura 1987，異名
- Bacillus choshinensis Takagi et al., 1993，異名
- 韓中芽孢桿菌 Bacillus chungangensis Cho et al., 2010
- Bacillus cibi Yoon et al., 2005，異名
- Bacillus ciccensis Liu et al., 2017，異名
- 環狀芽胞桿菌 Bacillus circulans Jordan 1890，異名
- Bacillus clarkii Nielsen et al., 1995，異名
- Bacillus clausii Nielsen et al., 1995，異名
- 芽孢乳酸菌 Bacillus coagulans Hammer 1915，異名
- Bacillus coahuilensis Cerritos et al., 2008
- 科氏芽胞桿菌 Bacillus cohnii Spanka and Fritze 1993，異名[9]
- Bacillus composti Yang et al., 2013，為Siminovitchia composti (Yang et al. 2013) Gupta et al. 2020的異名
- Bacillus crassostreae Chen et al., 2015，為Metabacillus crassostreae (Chen et al. 2015) Patel and Gupta 2020的異名
- Bacillus crescens Shivani et al., 2015，為Robertmurraya crescens (Shivani et al. 2015) Gupta et al. 2020的異名
- Bacillus cucumis Kämpfer et al., 2016，異名
- Bacillus curdlanolyticus Kanzawa et al., 1995，異名
- Bacillus cycloheptanicus Deinhard et al., 1988，異名
- Bacillus cytotoxicus Guinebretière et al., 2013
- Bacillus dafuensis Zheng et al., 2023[10]
- 達里湖芽孢桿菌 Bacillus daliensis Zhai et al., 2012，為Alkalicoccus daliensis(Zhai et al. 2012) Gupta et al. 2020的異名
- 大慶芽孢桿菌 Bacillus daqingensis Wang et al. 2023[11]
- Bacillus decisifrondis Zhang et al., 2007
- Bacillus decolorationis Heyrman et al., 2003，為Pseudalkalibacillus decolorationis (Heyrman et al. 2003) Joshi et al. 2022的異名
- Bacillus depressus Wei et al., 2016，為Cytobacillus depressus (Wei et al. 2016) Patel and Gupta 2020的異名
- Bacillus deserti Zhang et al., 2012，異名
- Bacillus dielmoensis Lo et al. 2021，拼寫錯誤
- Bacillus dielmonensis corrig. Lo et al. 2021，異名
- Bacillus dipsosauri Lawson et al., 1996，異名
- Bacillus drentensis Heyrman et al., 2004，異名
- Bacillus ectoiniformans Zhu et al., 2016
- Bacillus edaphicus Shelobolina et al., 1998，異名
- Bacillus ehimensis Kuroshima et al., 1996，異名
- Bacillus eiseniae Hong et al., 2012，異名
- Bacillus encimensis Dastager et al., 2015，異名
- Bacillus enclensis Dastager et al., 2014
- Bacillus endolithicus Parag et al., 2015，異名
- Bacillus endophyticus Reva et al., 2002，異名
- Bacillus endoradicis Zhang et al., 2012，異名
- Bacillus endozanthoxylicus Ma et al., 2017，異名
- Bacillus farraginis Scheldeman et al., 2004，異名
- Bacillus fastidiosus den Dooren de Jong 1929，異名
- Bacillus fengqiuensis Zhao et al., 2014
- Bacillus fermenti Hirota et al., 2018，異名
- Bacillus filamentosus Sonalkar et al., 2015，異名
- Bacillus firmus Bredemann and Werner 1933，異名
- Bacillus flexus (ex Batchelor 1919) Priest et al., 1989，異名
- Bacillus foraminis Tiago et al., 2006，異名
- Bacillus fordii Scheldeman et al., 2004，異名
- 台灣芽胞桿菌 Bacillus formosensis Lin et al., 2015，異名
- Bacillus formosus (ex Porter 1940) Shida et al., 1995，異名
- Bacillus fortis Scheldeman et al., 2004，異名
- Bacillus fumarioli Logan et al., 2000，異名
- 蘑菇芽胞桿菌 Bacillus fungorum Liu et al., 2020
- Bacillus funiculus Ajithkumar et al., 2002，異名
- Bacillus fusiformis (ex Meyer and Gottheil 1901) Priest et al., 1989，異名
- Bacillus gaemokensis Jung et al. 2021
- Bacillus galactophilus Takagi et al., 1993，為Brevibacillus agri (Nakamura 1993 ex Laubach and Rice 1916) Shida et al. 1996的異名
- Bacillus galactosidilyticus Heyndrickx et al., 2004，異名
- Bacillus galliciensis Balcázar et al., 2010，為Metabacillus galliciensis (Balcázar et al. 2010) Patel and Gupta 2020的異名
- Bacillus gelatini De Clerck et al., 2004，為Fictibacillus gelatini (De Clerck et al. 2004) Glaeser et al. 2013的異名
- Bacillus gibsonii Nielsen et al., 1995，異名
- Bacillus ginsengi Qiu et al., 2009，異名
- 人參芽孢桿菌 Bacillus ginsengihumi Ten et al., 2007，異名
- 人參土芽孢桿菌 Bacillus ginsengisoli Nguyen et al., 2013，異名
- Bacillus glennii Seuylemezian et al., 2020，異名
- Bacillus globisporus Larkin and Stokes 1967，異名
- Bacillus glucanolyticus Alexander and Priest 1989，異名
- Bacillus glycinifermentans Kim et al., 2015
- 戈壁芽孢桿菌 Bacillus gobiensis Liu et al., 2016
- Bacillus gordonae Pichinoty et al., 1987，異名
- Bacillus gossypii Kämpfer et al., 2015，異名
- Bacillus gottheilii Seiler et al., 2013，異名
- Bacillus graminis Bibi et al., 2011，異名
- Bacillus halmapalus Nielsen et al., 1995，異名
- 喜鹽噬糖芽胞桿菌 Bacillus haloalkaliphilus Fritze 1996，異名
- Bacillus halochares Pappa et al., 2010，異名
- 嗜鹽脫氮芽孢桿菌 Bacillus halodenitrificans Denariaz et al., 1989，異名
- Bacillus halodurans (ex Boyer et al., 1973) Nielsen et al., 1995，異名
- Bacillus halophilus Ventosa et al., 1990，異名
- Bacillus halosaccharovorans Mehrshad et al., 2013，異名
- Bacillus halotolerans (Delaporte and Sasson 1967) Tindall 2017
- Bacillus harenae
- Bacillus haynesii Dunlap et al., 2017
- Bacillus hemicellulosilyticus Nogi et al., 2005，異名
- Bacillus hemicentroti Chen et al., 2011，異名
- Bacillus herbersteinensis Wieser et al., 2005，異名
- Bacillus hisashii Nishida et al., 2015，異名
- Bacillus hominis Tohya et al. 2021[12]
- Bacillus horikoshii Nielsen et al., 1995，異名
- Bacillus horneckiae Vaishampayan et al., 2010，異名
- Bacillus horti Yumoto et al., 1998
- 惠州芽孢桿菌 Bacillus huizhouensis Li et al., 2014，異名
- 土芽胞桿菌 Bacillus humi Heyrman et al., 2005，異名
- Bacillus hwajinpoensis Yoon et al., 2004，異名
- Bacillus idriensis Ko et al., 2006，異名
- Bacillus inaquosorum (Rooney et al., 2009) Dunlap et al., 2020
- 印度芽孢桿菌 Bacillus indicus Suresh et al., 2004，異名
- Bacillus infantis Ko et al., 2006
- Bacillus infernus Boone et al., 1995
- Bacillus insolitus Larkin and Stokes 1967，異名
- Bacillus invictae Branquinho et al., 2014，異名
- Bacillus iocasae Wang et al., 2017，異名
- 伊朗芽孢桿菌 Bacillus iranensis Bagheri et al., 2012，異名
- Bacillus isabeliae Albuquerque et al., 2008
- Bacillus isronensis Shivaji et al., 2009，異名
- Bacillus jeddahensis Bittar et al., 2017，異名[13]
- Bacillus jeotgali Yoon et al., 2001，異名
- Bacillus kaustophilus (ex Prickett 1928) Priest et al., 1989，異名
- Bacillus kexueae Sun et al., 2018
- Bacillus kiskunsagensis Borsodi et al., 2017，異名[14]
- Bacillus kobensis Kanzawa et al., 1995，異名
- 科赫芽孢桿菌 Bacillus kochii Seiler et al., 2012，異名
- 小木偶形芽孢桿菌 Bacillus kokeshiiformis Poudel et al., 2014，異名
- 朝鮮芽孢桿菌 Bacillus koreensis Lim et al., 2006，韓國芽孢杆
- 庫爾勒芽孢桿菌 Bacillus korlensis Zhang et al., 2009，異名
- 膠凍樣芽孢桿菌 Bacillus kribbensis Lim et al., 2007，異名
- 克魯氏芽孢桿菌 Bacillus krulwichiae Yumoto et al., 2003，異名
- Bacillus lacisalsi Dong et al. 2021，異名
- Bacillus lacus Singh et al., 2018，異名
- Bacillus laevolacticus (ex Nakayama and Yanoshi 1967) Andersch et al., 1994，異名
- Bacillus larvae White 1906，異名
- Bacillus laterosporus Laubach 1916，異名
- Bacillus lautus (ex Batchelor 1919) Nakamura 1984，異名
- Bacillus lehensis Ghosh et al., 2007，異名
- Bacillus lentimorbus Dutky 1940，異名
- Bacillus lentus Gibson 1935，異名
- 地衣芽孢桿菌 Bacillus licheniformis (Weigmann 1898) Chester 1901
- Bacillus ligniniphilus Zhu et al., 2014，異名
- Bacillus lindianensis Dou et al., 2016，異名
- Bacillus litoralis Yoon and Oh 2005，異名
- 海淀沉積物芽孢桿菌 Bacillus litorisediminis Tang et al. 2023[15]
- Bacillus locisalis Márquez et al., 2011，為Salisediminibacterium locisalis (Márquez et al. 2011) Sultanpuram et al. 2015的異名
- Bacillus loiseleuriae Liu et al., 2016，為Peribacillus loiseleuriae (Liu et al. 2016) Patel and Gupta 2020的異名
- Bacillus lonarensis Reddy et al., 2015，為Shouchella lonarensis (Reddy et al. 2015) Joshi et al. 2022的異名
- Bacillus luciferensis Logan et al., 2002，為Gottfriedia luciferensis (Logan et al. 2002) Gupta et al. 2020的異名
- Bacillus luteolus Shi et al., 2011，為Cytobacillus luteolus (Shi et al. 2011) Gupta et al. 2020的異名
- Bacillus luteus Subhash et al., 2014，為Alkalicoccus luteus (Subhash et al. 2014) Gupta et al. 2020的異名
- 泥芽胞桿菌 Bacillus luti Liu et al., 2017
- Bacillus lycopersici Lin et al., 2015，為Caldibacillus lycopersici (Lin et al. 2015) Gupta et al. 2020的異名
- 澳門芽孢桿菌 Bacillus macauensis Zhang et al., 2006，異名
- Bacillus macerans Schardinger 1905，異名
- Bacillus macquariensis Marshall and Ohye 1966，異名
- Bacillus macyae Santini et al., 2004，異名
- Bacillus malacitensis Ruiz-García et al., 2005，異名
- Bacillus malikii Abbas et al., 2016，異名
- Bacillus mangrovi Gupta et al., 2017，異名
- Bacillus manliponensis Jung et al. 2021
- Bacillus mannanilyticus Nogi et al., 2005，為Caldalkalibacillus mannanilyticus (Nogi et al. 2005) Gupta et al. 2020的異名
- Bacillus manusensis Sun et al., 2018
- Bacillus marinisedimentorum Guo et al., 2018
- Bacillus marinus (Rüger and Richter 1979) Rüger 1983，為Jeotgalibacillus marinus (Rüger and Richter 1979) Yoon et al. 2010的異名
- Bacillus marisflavi Yoon et al., 2003，為Rossellomorea marisflavi (Yoon et al. 2003) Gupta et al. 2020的異名
- 海洋芽孢桿菌 Bacillus marismortui Arahal et al., 1999，異名
- Bacillus maritimus Pal et al., 2017，為Mesobacillus maritimus (Pal et al. 2017) Patel and Gupta 2020的異名
- Bacillus marmarensis Denizci et al., 2010，為Alkalihalophilus marmarensis (Denizci et al. 2010) Joshi et al. 2022的異名
- 摩洛哥芽孢桿菌 Bacillus maroccanus Delaporte and Sasson 1967
- 馬賽芽孢桿菌 Bacillus massiliensis Glazunova et al., 2006，為Ureibacillus massiliensis (Glazunova et al. 2006) Gupta and Patel 2020的異名
- Bacillus massiliigabonensis corrig. Sarr et al. 2021，也拼作：Bacillus massiliogabonensis
- Bacillus massiliigorillae corrig. Keita et al. 2023[16]，也拼作：Bacillus massiliogorillae
- Bacillus massiliosenegalensis Ramasamy et al., 2016，異名
- 巨大芽孢桿菌 Bacillus megaterium de Bary 1884，為Priestia megaterium (de Bary 1884) Gupta et al. 2020的異名
- Bacillus mesonae Liu et al., 2014，為Neobacillus mesonae (Liu et al. 2014) Patel and Gupta 2020的異名
- Bacillus mesophilus Zhou et al., 2017
- Bacillus methanolicus Arfman et al., 1992
- Bacillus methylotrophicus Madhaiyan et al., 2010，為Bacillus velezensis Ruiz-García et al. 2005的異名
- Bacillus migulanus Takagi et al., 1993，為Aneurinibacillus migulanus (Takagi et al. 1993) Shida et al. 1996的異名
- Bacillus miscanthi Shin et al., 2020，為Shouchella miscanthi (Shin et al. 2020) Joshi et al. 2022的異名
- 運動芽胞桿菌 Bacillus mobilis Liu et al., 2017
- 莫哈韋芽孢桿菌 Bacillus mojavensis Roberts et al., 1994
- Bacillus mucilaginosus Avakyan et al., 1998，異名
- Bacillus muralis Heyrman et al., 2005，異名
- Bacillus murimartini Borchert et al., 2007，異名
- 蕈狀芽孢桿菌 Bacillus mycoides Flügge 1886
- Bacillus naganoensis Tomimura et al., 1990，異名
- Bacillus nakamurai Dunlap et al., 2016
- 南海芽孢桿菌 Bacillus nanhaiensis Chen et al., 2011，異名
- Bacillus nanhaiisediminis Zhang et al., 2011，異名[17]
- Bacillus natronophilus Menes et al., 2020，異名
- Bacillus ndiopicus Lo et al., 2017
- Bacillus nealsonii Venkateswaran et al., 2003，異名
- Bacillus neidei Nakamura et al., 2002，異名
- Bacillus neizhouensis Chen et al., 2009，異名
- Bacillus niabensis Kwon et al., 2007，異名
- Bacillus niacini Nagel and Andreesen 1991，異名
- 硝酸鹽還原芽胞桿菌 Bacillus nitratireducens Liu et al., 2017
- 諾里奇芽胞桿菌 Bacillus norwichensis Pallen, 2024[18]，種名指是英國英格蘭東部城市諾里奇（Norwich）
- Bacillus notoginsengisoli Zhang et al., 2017，異名
- Bacillus novalis Heyrman et al., 2004，異名
- Bacillus oceani Song et al., 2016，異名
- Bacillus oceanisediminis Zhang et al., 2010，異名[19]
- Bacillus odysseyi La Duc et al., 2004，異名
- Bacillus okhensis Nowlan et al., 2006，異名
- Bacillus okuhidensis Li et al., 2002，異名
- Bacillus oleivorans Azmatunnisa et al., 2015
- Bacillus oleronius Kuhnigk et al., 1996，異名
- Bacillus onubensis Dominguez-Moñino et al., 2018，異名
- Bacillus oryzaecorticis Hong et al., 2014，異名
- Bacillus oryzisoli Zhang et al., 2016，異名
- Bacillus oryziterrae Bao et al., 2017，異名
- Bacillus oshimensis Yumoto et al., 2005，異名
- Bacillus pabuli (ex Schieblich 1923) Nakamura 1984，異名
- 太平洋芽胞桿菌 Bacillus pacificus Liu et al., 2017
- 巴基斯坦芽孢桿菌 Bacillus pakistanensis Roohi et al., 2014
- Bacillus pallidus Zhou et al., 2008，異名
- Bacillus pallidus Scholz et al., 1988，異名
- Bacillus panacisoli Choi and Cha 2014，異名
- Bacillus panaciterrae Ten et al., 2006，異名
- Bacillus pantothenticus Proom and Knight 1950，異名
- Bacillus parabrevis Takagi et al., 1993，異名
- Bacillus paraflexus Chandna et al., 2013，異名
- 副地衣芽孢桿菌 Bacillus paralicheniformis Dunlap et al., 2015
- Bacillus paramobilis Tohya et al. 2021[20]
- 副蕈狀芽胞桿菌 Bacillus paramycoides Liu et al., 2017
- 副炭疽芽胞桿菌 Bacillus paranthracis Liu et al., 2017
- Bacillus pasinlerensis Baltaci et al., 2020，異名
- Bacillus pasteurii (Miquel 1889) Chester 1898，異名
- 巴塔哥尼亞芽孢桿菌 Bacillus patagoniensis Olivera et al., 2005，為Shouchella patagoniensis (Olivera et al. 2005) Joshi et al. 2022的異名
- Bacillus peoriae Montefusco et al., 1993，異名
- Bacillus persepolensis Amoozegar et al., 2009，異名
- Bacillus persicus Didari et al., 2013，為Mesobacillus persicus (Didari et al. 2013) Patel and Gupta 2020的異名
- Bacillus pervagus Kosowski et al., 2014
- 耐壓芽胞桿菌 Bacillus piezotolerans Yu et al., 2019，為Neobacillus piezotolerans (Yu et al. 2019) Gupta et al. 2020的異名
- Bacillus pinisoli Huang et al. 2023[21]
- Bacillus piscicola Daroonpunt et al., 2016
- Bacillus plakortidis Borchert et al., 2007，異名
- Bacillus pocheonensis Ten et al., 2007，異名
- Bacillus polygoni Aino et al., 2008，異名
- Bacillus polymachus Nguyen and Kim 2015，異名
- Bacillus polymyxa (Prazmowski 1880) Macé 1889，異名
- Bacillus popilliae Dutky 1940，異名
- Bacillus populi Liu et al., 2018，異名
- Bacillus praedii Liu et al., 2017，異名
- 解蛋白芽胞桿菌 Bacillus proteolyticus Liu et al., 2017
- Bacillus pseudalcaliphilus corrig. Nielsen et al., 1995，異名
- Bacillus pseudalcalophilus Nielsen et al., 1995，拼寫錯誤
- Bacillus pseudofirmus Nielsen et al., 1995，異名
- Bacillus pseudomycoides Nakamura 1998
- Bacillus psychrodurans Abd El-Rahman et al., 2002，異名
- Bacillus psychrophilus (ex Larkin and Stokes 1967) Nakamura 1984，異名
- Bacillus psychrosaccharolyticus (ex Larkin and Stokes 1967) Priest et al., 1989，異名
- Bacillus psychrotolerans Abd El-Rahman et al., 2002，為'Psychrobacillus psychrotolerans (Abd El-Rahman et al. 2002) Krishnamurthi et al. 2011的異名
- Bacillus pulvifaciens (ex Katznelson 1950) Nakamura 1984，異名
- 短小芽孢桿菌 Bacillus pumilus Meyer and Gottheil， 1901
- Bacillus purgationiresistans Vaz-Moreira et al., 2012，拼寫錯誤
- 抗淨化芽胞桿菌 Bacillus purgationiresistens Vaz-Moreira et al., 2012，異名
- Bacillus pycnus Nakamura et al., 2002，為Rummeliibacillus pycnus (Nakamura et al. 2002) Vaishampayan et al. 2009的異名
- 青島芽胞桿菌 Bacillus qingdaonensis Wang et al., 2007，異名
- 慶笙芽胞桿菌 Bacillus qingshengii Xi et al., 2014，異名
- Bacillus reuszeri Shida et al., 1995，為Brevibacillus reuszeri (Shida et al. 1995) Shida et al. 1996的異名
- Bacillus rhizoplanae Kämpfer et al. 2022
- Bacillus rhizosphaerae Madhaiyan et al., 2013，為慶笙普里斯特氏菌 （Priestia qingshengii (Xi et al. 2014) Gupta et al. 2020）的異名
- Bacillus rigiliprofundi Sylvan et al., 2015，異名
- Bacillus rigui Baik et al., 2010，異名
- Bacillus ruris Heyndrickx et al., 2005，異名
- Bacillus safensis Satomi et al., 2006
- Bacillus saganii Seuylemezian et al., 2020，異名
- Bacillus salacetis Daroonpunt et al., 2019
- Bacillus salarius Lim et al., 2006，為Salibacterium salarium (Lim et al. 2006) Gupta et al. 2020的異名
- Bacillus salexigens Garabito et al., 1997，為Virgibacillus salexigens (Garabito et al. 1997) Heyrman et al. 2003的異名
- Bacillus salidurans Son et al., 2019，為Ferdinandcohnia salidurans (Son et al. 2019) Gupta et al. 2020的異名
- Bacillus salinus Kang et al., 2020
- Bacillus saliphilus Romano et al., 2005，為Alkalicoccus saliphilus (Romano et al. 2005) Zhao et al. 2017的異名
- Bacillus salis Seck et al. 2023[22]
- Bacillus salitolerans Zhang et al., 2015
- Bacillus salsus Amoozegar et al., 2013，為Litchfieldia salsa (Amoozegar et al. 2013) Gupta et al. 2020的異名
- Bacillus sanguinis Tohya et al. 2021[23]
- Bacillus schlegelii Schenk and Aragno 1981，異名
- 沉積物芽孢桿菌 Bacillus sediminis Yu et al., 2014，異名
- Bacillus selenatarsenatis Yamamura et al., 2007，異名
- Bacillus selenitireducens Switzer Blum et al., 2001，異名
- Bacillus seohaeanensis Lee et al., 2006
- Bacillus shacheensis Lei et al., 2014，異名
- Bacillus shackletonii Logan et al., 2004，異名
- Bacillus shivajii Kumar et al., 2018
- 暹羅芽孢桿菌 Bacillus siamensis Sumpavapol et al., 2010
- Bacillus silvestris Rheims et al., 1999，異名
- Bacillus simplex (ex Meyer and Gottheil 1901) Priest et al., 1989，異名
- Bacillus sinesaloumensis Sarr et al. 2021
- Bacillus siralis Pettersson et al., 2000，異名
- Bacillus smithii Nakamura et al., 1988
- Bacillus solani Liu et al., 2015，異名
- 土壤芽孢桿菌 Bacillus soli Heyrman et al., 2004，異名
- Bacillus solimangrovi Lee et al., 2014
- Bacillus solisalsi Liu et al., 2009，異名[24]
- Bacillus solisilvae Pan et al., 2017，異名
- Bacillus songklensis Kang et al., 2013
- Bacillus sonorensis Palmisano et al., 2001
- 球形芽孢桿菌 Bacillus sphaericus Meyer and Neide 1904，異名
- Bacillus spizizenii (Nakamura et al., 1999) Dunlap et al., 2020
- 海綿芽孢桿菌 Bacillus spongiae Lee et al., 2019
- Bacillus sporothermodurans Pettersson et al., 1996，異名
- Bacillus stamsii Müller et al., 2016，異名
- 嗜熱脂肪芽孢桿菌 Bacillus stearothermophilus Donk 1920，異名
- Bacillus stercoris (Adelskov and Patel 2017) Dunlap et al., 2020
- Bacillus suaedae Lei et al. 2022
- Bacillus suaedae Xu et al. 2022，異名
- Bacillus suaedaesalsae Xu et al. 2022
- Bacillus subterraneus Kanso et al., 2002，異名
- 枯草芽孢桿菌 Bacillus subtilis (Ehrenberg 1835) Cohn 1872
- Bacillus swezeyi Dunlap et al., 2017
- Bacillus taeanensis Lim et al., 2006
- 台灣芽孢桿菌 Bacillus taiwanensis Liu et al., 2015，為Priestia taiwanensis (Liu et al. 2015) Gupta et al. 2020的異名
- Bacillus tamaricis Zhang et al., 2018，為Evansella tamaricis (Zhang et al. 2018) Narsing Rao et al. 2022的異名
- Bacillus taxi Tuo et al., 2020，為Niallia taxi (Tuo et al. 2020) Gupta et al. 2020的異名
- Bacillus tepidiphilus Narsing Rao et al. 2021，為Peribacillus tepidiphilus (Narsing Rao et al. 2021) Narsing Rao et al. 2023的異名
- 特基拉芽孢桿菌 Bacillus tequilensis Gatson et al., 2006
- Bacillus terrae Díez-Méndez et al., 2017，為Siminovitchia terrae (Díez-Méndez et al. 2017) Gupta et al. 2020的異名
- Bacillus thermantarcticus Nicolaus et al., 2002，異名
- Bacillus thermoaerophilus Meier-Stauffer et al., 1996，異名
- Bacillus thermoamylovorans Combet-Blanc et al., 1995
- Bacillus thermoantarcticus Nicolaus et al., 2002，拼寫錯誤
- Bacillus thermocatenulatus Golovacheva et al., 1991，異名
- Bacillus thermocloacae Demharter and Hensel 1989
- Bacillus thermocloaceae Demharter and Hensel 1989，拼寫錯誤
- Bacillus thermocopriae Han et al., 2013，異名
- Bacillus thermodenitrificans (ex Klaushofer and Hollaus 1970) Manachini et al., 2000，異名
- Bacillus thermoglucosidasius Suzuki 1984，異名
- Bacillus thermolactis Coorevits et al., 2011，異名
- Bacillus thermoleovorans Zarilla and Perry 1988，異名
- Bacillus thermophilus Yang et al., 2013，異名
- Bacillus thermoruber (ex Guicciardi et al., 1968) Manachini et al., 1985，異名
- Bacillus thermosphaericus Andersson et al., 1996，異名
- Bacillus thermotolerans Yang et al., 2013
- Bacillus thiaminolyticus (ex Kuno 1951) Nakamura 1990，異名
- Bacillus thioparans corrig. Pérez-Ibarra et al., 2007，異名
- Bacillus thioparus Pérez-Ibarra et al., 2007，拼寫錯誤
- 蘇雲金芽孢桿菌 Bacillus thuringiensis Berliner 1915
- Bacillus tianshenii Jiang et al., 2014
- Bacillus toyonensis Jiménez et al., 2014
- 熱帶芽胞桿菌 Bacillus tropicus Liu et al., 2017
- Bacillus trypoxylicola Aizawa et al., 2010，異名
- Bacillus tusciae Bonjour and Aragno 1985，異名
- Bacillus urbisdiaboli Liu et al., 2019，異名
- 烏魯木齊芽孢桿菌 Bacillus urumqiensis Zhang et al., 2016
- Bacillus validus (ex Bredemann and Heigener 1935) Nakamura 1984，異名
- Bacillus vallismortis Roberts et al., 1996
- Bacillus vedderi Agnew et al., 1996，異名
- Bacillus velezensis Ruiz-García et al., 2005
- 越南芽孢桿菌 Bacillus vietnamensis Noguchi et al., 2004，異名
- Bacillus vini Ma et al., 2017，異名
- Bacillus vireti Heyrman et al., 2004，異名
- Bacillus vulcani Caccamo et al., 2000，異名
- Bacillus wakoensis Nogi et al., 2005，異名
- 魏登施泰芽孢桿菌 Bacillus weihenstephanensis Lechner et al., 1998，異名
- Bacillus wiedmannii Miller et al., 2016
- 五大連池芽孢桿菌 Bacillus wudalianchiensis Liu et al., 2017
- 武夷山芽孢桿菌 Bacillus wuyishanensis Liu et al., 2015，異名
- 廈門芽孢桿菌 Bacillus xiamenensis Lai et al., 2014
- Bacillus xiaoxiensis Chen et al., 2011，異名
- 霞浦海溝芽胞桿菌 Bacillus xiapuensis Liu et al., 2019
- 雅浦海溝芽胞桿菌 Bacillus yapensis Xu et al. 2020[25]
- Bacillus zeae Kämpfer et al., 2017，異名
- 漳州芽孢桿菌 Bacillus zhangzhouensis Liu et al., 2016
- 湛江芽孢桿菌 Bacillus zhanjiangensis Chen et al., 2012，異名
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