フラボバクテリウム属（Flavobacterium）とは、細菌における属の一つであり、グラム陰性の非運動性または運動性の桿菌である。現在まで200種以上が確認されており[12]、2021年7月現在、正式な小分類の名称の数は245個であり、シノニムを含んだ公開された有効な小分類名は274個ある[11]。フラボバクテリウム属の細菌は、多様な土壌及び淡水環境で発見される。いくつかの種は、淡水魚に対する病原性を持つ[13]。
概要 フラボバクテリウム属, 分類 ...
| フラボバクテリウム属 |
 |
| 分類 |
|
|
| タイプ種 |
| Flavobacterium aquatile |
| 種 |
|
Flavobacterium acidificum Steinhaus 1941 (Approved Lists 1980)[1]
Flavobacterium aciduliphilum Kang et al. 2013[2]
Flavobacterium acidurans Millar 1973 (Approved Lists 1980)[3]
Flavobacterium ahnfeltiae Nedashkovskaya et al. 2015[4]
Flavobacterium ajazii Khan et al. 2021[5]
Flavobacterium akiainvivens Kuo et al. 2013[6]
Flavobacterium album Baek et al. 2018[7]
Flavobacterium algicola Miyashita et al. 2010[8]
Flavobacterium alkalisoli Xu et al. 2020[9]
Flavobacterium alvei Lee and Jeon 2018[10]
Flavobacterium amnicola Sheu et al. 2019 [11]
Flavobacterium amnigenum Patil et al. 2019 [11]
Flavobacterium amniphilum Sheu et al. 2017 [11]
Flavobacterium anhuiense Liu et al. 2008 [11]
Flavobacterium antarcticum Yi et al. 2005 [11]
Flavobacterium aquariorum Joung et al. 2020 [11]
Flavobacterium aquaticum Subhash et al. 2013 [11]
Flavobacterium aquatile (Frankland and Frankland 1889) Bergey et al. 1923 (Approved Lists 1980) [11]
Flavobacterium aquicola Hatayama et al. 2016 [11]
Flavobacterium aquidurense Cousin et al. 2007 [11]
Flavobacterium aquimarinum Kristyanto et al. 2018 [11]
Flavobacterium araucananum Kämpfer et al. 2012 [11]
Flavobacterium arcticum Li et al. 2017 [11]
Flavobacterium ardleyense Zhou et al. 2017 [11]
Flavobacterium arsenatis Ao et al. 2014 [11]
Flavobacterium arsenitoxidans Khianngam et al. 2015 [11]
Flavobacterium artemisiae Zhao et al. 2018 [11]
Flavobacterium aurantiibacter Cai et al. 2018 [11]
Flavobacterium baculatum Chhetri et al. 2021 [11]
Flavobacterium banpakuense Kim et al. 2011 [11]
Flavobacterium beibuense Fu et al. 2011 [11]
Flavobacterium bizetiae Mühle et al. 2021 [11]
Flavobacterium bomense corrig. Liu et al. 2019 [11]
Flavobacterium branchiarum Zamora et al. 2016 [11]
Flavobacterium branchiicola Zamora et al. 2016 [11]
Flavobacterium branchiophilum corrig. Wakabayashi et al. 1989 [11]
Flavobacterium brevivitae Chen et al. 2016 [11]
Flavobacterium buctense Feng et al. 2016 [11]
Flavobacterium caeni Liu et al. 2010 [11]
Flavobacterium caseinilyticum Chaudhary et al. 2020 [11]
Flavobacterium cauense Qu et al. 2009 [11]
Flavobacterium celericrescens Wu et al. 2021 [11]
Flavobacterium cellulosilyticum Chaudhary et al. 2020 [11]
Flavobacterium cerinum Zhang et al. 2019 [11]
Flavobacterium cheniae Qu et al. 2008 [11]
Flavobacterium cheonanense Lee et al. 2012 [11]
Flavobacterium cheongpyeongense Joung et al. 2019 [11]
Flavobacterium cheonhonense Lee et al. 2014 [11]
Flavobacterium chilense Kämpfer et al. 2012 [11]
Flavobacterium chryseum Králová et al. 2018 [11]
Flavobacterium chuncheonense Park et al. 2017 [11]
Flavobacterium chungangense Kim et al. 2009 [11]
Flavobacterium chungbukense Lim et al. 2011 [11]
Flavobacterium chungnamense Lee et al. 2012 [11]
Flavobacterium circumlabens Králová et al. 2019 [11]
Flavobacterium collinsense Zhang et al. 2016 [11]
Flavobacterium collinsii Zamora et al. 2016 [11]
Flavobacterium columnare (Bernardet and Grimont 1989) Bernardet et al. 1996 [11]
Flavobacterium commune Ekwe and Kim 2018 [11]
Flavobacterium compostarboris Kim et al. 2012 [11]
Flavobacterium crassostreae Choi et al. 2017 [11]
Flavobacterium croceum Park et al. 2006 [11]
Flavobacterium crocinum Baek et al. 2018 [11]
Flavobacterium cucumis Weon et al. 2007 [11]
Flavobacterium cupreum Králová et al. 2019 [11]
Flavobacterium cutihirudinis Glaeser et al. 2013 [11]
Flavobacterium cyanobacteriorum Cai et al. 2018 [11]
Flavobacterium daejeonense Kim et al. 2006 [11]
Flavobacterium daemonense corrig. Ngo et al. 2015 [11]
Flavobacterium dankookense Lee et al. 2012 [11]
Flavobacterium dasani Chaudhary et al. 2020 [11]
Flavobacterium defluvii Park et al. 2007 [11]
Flavobacterium degerlachei Van Trappen et al. 2004 [11]
Flavobacterium denitrificans Horn et al. 2005 [11]
Flavobacterium devorans (Zimmermann 1890) Bergey et al. 1923 (Approved Lists 1980) [11]
Flavobacterium dispersum Chen et al. 2017 [11]
Flavobacterium dongtanense Xiao et al. 2011 [11]
Flavobacterium eburneum Hwang et al. 2017 [11]
Flavobacterium edaphi Chhetri et al. 2019 [11]
Flavobacterium effusum Chen et al. 2018 [11]
Flavobacterium endophyticum Gao et al. 2015 [11]
Flavobacterium enshiense Dong et al. 2013 [11]
Flavobacterium faecale Kim et al. 2014 [11]
Flavobacterium filum Ryu et al. 2007 [11]
Flavobacterium flaviflagrans Dahal et al. 2017 [11]
Flavobacterium flevense (van der Meulen et al. 1974) Bernardet et al. 1996 [11]
Flavobacterium fluminis Ahn et al. 2017 [11]
Flavobacterium fluviale Baek et al. 2020 [11]
Flavobacterium fluviatile Chen et al. 2018 [11]
Flavobacterium fluvii Lee et al. 2010 [11]
Flavobacterium foetidum Bu and Cha 2018 [11]
Flavobacterium fontis Chun et al. 2013 [11]
Flavobacterium frigidarium Humphry et al. 2001 [11]
Flavobacterium frigidimaris Nogi et al. 2005 [11]
Flavobacterium frigoris Van Trappen et al. 2004 [11]
Flavobacterium fryxellicola Van Trappen et al. 2005 [11]
Flavobacterium fulvum Nguyen and Kim 2016 [11]
Flavobacterium gelidilacus Van Trappen et al. 2003 [11]
Flavobacterium gillisiae McCammon and Bowman 2000 [11]
Flavobacterium gilvum Shin et al. 2017 [11]
Flavobacterium ginsengisoli Kim et al. 2013 [11]
Flavobacterium ginsenosidimutans Yang et al. 2011 [11]
Flavobacterium glaciei Zhang et al. 2006 [11]
Flavobacterium glycines Madhaiyan et al. 2010 [11]
Flavobacterium gossypii Kämpfer et al. 2017 [11]
Flavobacterium granuli Aslam et al. 2005 [11]
Flavobacterium gyeonganense Kim et al. 2014 [11]
Flavobacterium hankyongi Liu et al. 2018 [11]
Flavobacterium haoranii Zhang et al. 2010 [11]
Flavobacterium hauense Dong et al. 2013 [11]
Flavobacterium hercynium Cousin et al. 2007 [11]
Flavobacterium hibernum McCammon et al. 1998 [11]
Flavobacterium hibisci Moya et al. 2017 [11]
Flavobacterium hiemivividum Chaudhary et al. 2020 [11]
Flavobacterium humicola Nguyen and Kim 2016 [11]
Flavobacterium hydatis Bernardet et al. 1996 [11]
Flavobacterium hydrophilum Joung et al. 2019 [11]
Flavobacterium ichthyis Chen et al. 2020 [11]
Flavobacterium indicum Saha and Chakrabarti 2006 [11]
Flavobacterium inkyongense Park et al. 2017 [11]
Flavobacterium jejuense corrig. Park et al. 2016 [11]
Flavobacterium johnsoniae corrig. (Stanier 1947) Bernardet et al. 1996 [11]
Flavobacterium jumunjinense Joung et al. 2013 [11]
Flavobacterium keumense Ekwe et al. 2017 [11]
Flavobacterium kingsejongi Choi et al. 2018 [11]
Flavobacterium knui Kim et al. 2019 [11]
Flavobacterium koreense Lee et al. 2012 [11]
Flavobacterium kyungheense corrig. Son et al. 2014 [11]
Flavobacterium lacicola Park et al. 2018 [11]
Flavobacterium lacunae Chen et al. 2017 [11]
Flavobacterium lacus Li et al. 2014 [11]
Flavobacterium laiguense Yang et al. 2019 [11]
Flavobacterium limi Moya et al. 2017 [11]
Flavobacterium limicola Tamaki et al. 2003 [11]
Flavobacterium limnosediminis Lee et al. 2013 [11]
Flavobacterium lindanitolerans Jit et al. 2008 [11]
Flavobacterium longum Fujii et al. 2014 [11]
Flavobacterium lotistagni Wu et al. 2021 [11]
Flavobacterium luteum Park et al. 2017 [11]
Flavobacterium luticocti Liu et al. 2017 [11]
Flavobacterium lutivivi Feng et al. 2016 [11]
Flavobacterium macacae Li et al. 2020 [11]
Flavobacterium macrobrachii Sheu et al. 2011 [11]
Flavobacterium magnum Baek et al. 2018 [11]
Flavobacterium maotaiense Feng et al. 2015 [11]
Flavobacterium maris Romanenko et al. 2016 [11]
Flavobacterium microcysteis Seo et al. 2020 [11]
Flavobacterium micromati Van Trappen et al. 2004 [11]
Flavobacterium myungsuense Joung et al. 2012 [11]
Flavobacterium nackdongense Kim and Yu 2020 [11]
Flavobacterium naphthae Chaudhary and Kim 2018 [11]
Flavobacterium nitratireducens Nupur et al. 2013 [11]
Flavobacterium nitrogenifigens Kämpfer et al. 2015 [11]
Flavobacterium niveum Chen et al. 2019 [11]
Flavobacterium noncentrifugens Zhu et al. 2013 [11]
Flavobacterium notoginsengisoli Zhang et al. 2016 [11]
Flavobacterium oceanosedimentum Carty and Litchfield 1978 (Approved Lists 1980) [11]
Flavobacterium olei Chaudhary and Kim 2017 [11]
Flavobacterium omnivorum Zhu et al. 2003 [11]
Flavobacterium oncorhynchi Zamora et al. 2012 [11]
Flavobacterium orientale Li et al. 2017 [11]
Flavobacterium oryzae Chen et al. 2014 [11]
Flavobacterium ovatum Ren et al. 2018 [11]
Flavobacterium pallidum Baek et al. 2018 [11]
Flavobacterium palustre Feng et al. 2015 [11]
Flavobacterium panici Kämpfer et al. 2020 [11]
Flavobacterium paronense Joung et al. 2016 [11]
Flavobacterium pectinovorum (Reichenbach 1989) Bernardet et al. 1996 [11]
Flavobacterium pedocola Nguyen and Kim 2016 [11]
Flavobacterium phocarum Zhou et al. 2018 [11]
Flavobacterium phragmitis Liu et al. 2011 [11]
Flavobacterium phycosphaerae Kim et al. 2021 [11]
Flavobacterium piscinae Chen et al. 2019 [11]
Flavobacterium piscis Zamora et al. 2014 [11]
Flavobacterium plurextorum Zamora et al. 2014 [11]
Flavobacterium ponti Yoon et al. 2011 [11]
Flavobacterium procerum Feng et al. 2015 [11]
Flavobacterium profundi Wang et al. 2020 [11]
Flavobacterium psychrolimnae Van Trappen et al. 2005 [11]
Flavobacterium psychrophilum (Bernardet and Grimont 1989) Bernardet et al. 1996 [11]
Flavobacterium psychroterrae Králová et al. 2018 [11]
Flavobacterium psychrotolerans Yang et al. 2020 [11]
Flavobacterium qiangtangense corrig. Huang et al. 2015 [11]
Flavobacterium quisquiliarum Zhang et al. 2017 [11]
Flavobacterium rakeshii Kaur et al. 2012 [11]
Flavobacterium ranwuense Zhang et al. 2019 [11]
Flavobacterium reichenbachii Ali et al. 2009 [11]
Flavobacterium resistens Ryu et al. 2008 [11]
Flavobacterium restrictum Zhang et al. 2020 [11]
Flavobacterium rhamnosiphilum Zhang et al. 2020 [11]
Flavobacterium riviphilum Sheu et al. 2018 [11]
Flavobacterium rivuli Ali et al. 2009 [11]
Flavobacterium saccharophilum (Reichenbach 1989) Bernardet et al. 1996 [11]
Flavobacterium salilacus Debnath et al. 2020 [11]
Flavobacterium saliperosum Wang et al. 2006 [11]
Flavobacterium salmonis Kämpfer et al. 2020 [11]
Flavobacterium sandaracinum Chaudhary et al. 2020 [11]
Flavobacterium sangjuense Kim et al. 2021 [11]
Flavobacterium sediminilitoris Park et al. 2018 [11]
Flavobacterium sediminis Bae et al. 2018 [11]
Flavobacterium segetis Yi and Chun 2006 [11]
Flavobacterium seoulense Shin et al. 2015 [11]
Flavobacterium sharifuzzamanii Debnath et al. 2019 [11]
Flavobacterium silvisoli Chaudhary et al. 2019 [11]
Flavobacterium sinopsychrotolerans Xu et al. 2011 [11]
Flavobacterium soli Yoon et al. 2006 [11]
Flavobacterium soyangense Nam et al. 2017 [11]
Flavobacterium squillarum Sheu et al. 2013 [11]
Flavobacterium stagni Chen et al. 2019 [11]
Flavobacterium suaedae Sun et al. 2016 [11]
Flavobacterium subsaxonicum Ali et al. 2009 [11]
Flavobacterium succinicans (Reichenbach 1989) Bernardet et al. 1996 [11]
Flavobacterium sufflavum Chen et al. 2019 [11]
Flavobacterium suncheonense Kim et al. 2006 [11]
Flavobacterium supellecticarium Lin et al. 2020 [11]
Flavobacterium suzhouense Zhang et al. 2015 [11]
Flavobacterium swingsii Ali et al. 2009 [11]
Flavobacterium tangerinum corrig. Li et al. 2020 [11]
Flavobacterium tegetincola McCammon and Bowman 2000 [11]
Flavobacterium terrae Weon et al. 2007 [11]
Flavobacterium terrigena Yoon et al. 2007 [11]
Flavobacterium terriphilum Zhang et al. 2016 [11]
Flavobacterium thermophilum Loginova and Egorova 1982 [11]
Flavobacterium tiangeerense Xin et al. 2009 [11]
Flavobacterium tibetense Phurbu et al. 2019 [11]
Flavobacterium tilapiae Chen et al. 2013 [11]
Flavobacterium tistrianum Suwannachart et al. 2016 [11]
Flavobacterium tructae Zamora et al. 2014 [11]
Flavobacterium tyrosinilyticum Du and Yi 2016 [11]
Flavobacterium ummariense Lata et al. 2012 [11]
Flavobacterium ureilyticum Dahal and Kim 2019 [11]
Flavobacterium urocaniciphilum Fujii et al. 2014 [11]
Flavobacterium urumqiense Dong et al. 2012 [11]
Flavobacterium ustbae Liu et al. 2019 [11]
Flavobacterium verecundum Sheu et al. 2016 [11]
Flavobacterium vireti Singh et al. 2015 [11]
Flavobacterium viscosum corrig. Li et al. 2020 [11]
Flavobacterium weaverense Yi and Chun 2006 [11]
Flavobacterium xanthum (ex Inoue and Komagata 1976) McCammon and Bowman 2000 [11]
Flavobacterium xinjiangense Zhu et al. 2003 [11]
Flavobacterium xueshanense Dong et al. 2012 [11]
Flavobacterium yanchengense Hu et al. 2013 [11]
Flavobacterium yonginense Joung et al. 2012 [11]
Flavobacterium zepuense Zhang et al. 2020 [11]
Flavobacterium zhairuonense corrig. Debnath et al. 2020 [11] |
閉じる
ジンクフィンガーヌクレアーゼと転写活性化因子様エフェクターヌクレアーゼで使用されているII型制限エンドヌクレアーゼFok1はF. okeanokoitesに由来する[14]。
フラボバクテリウム属菌株には、ナイロン6製造の副産物を代謝できるナイロン分解細菌のKI72株がある[15]。
Ji Young Kang, Jeesun Chun 1, Kwang Yeop Jahng. “Flavobacterium aciduliphilum sp. nov., isolated from freshwater, and emended description of the genus Flavobacterium”. International Journal of Systematic and Evolutionary Microbiology 63 (5): 1633-1638. doi:10.1099/ijs.0.044495-0. PMID 22904226. W. N. MILLAR. “Heterotrophic bacterial population in acid coal mine water: Flavobacterium acidurans sp. n.”. International Journal of Systematic Bacteriology 23: 142-150. doi:10.1099/00207713-23-2-142. Nedashkovskaya OI, Balabanova LA, Zhukova NV, Kim SJ, Bakunina IY, Rhee SK. “Flavobacterium ahnfeltiae sp. nov., a new marine polysaccharide-degrading bacterium isolated from a Pacific red alga”. Archives of Microbiology 196 (10): 745-752. doi:10.1007/s00203-014-1010-2. PMID 25002135. Khan I, Debnath SC, Yan C, Chen C, Xu Y, Wang WJ, Yu YC, Zheng DQ, Xu JZ, Wang PM.. “Flavobacterium ajazii sp. nov., Isolated from Seaweed of Gouqi Island, China”. Current Microbiology data=2020 Oct 77 (10): 2925-2932. doi:10.1007/s00284-020-02112-1. PMID 32661679. Kuo I, Saw J, Kapan DD, Christensen S, Kaneshiro KY, Donachie SP. “Flavobacterium akiainvivens sp. nov., from decaying wood of Wikstroemia oahuensis, Hawai'i, and emended description of the genus Flavobacterium”. International Journal of Systematic and Evolutionary Microbiology 63 (Pt 9): 3280-3286. doi:10.1099/ijs.0.047217-0. PMID 23475344. Baek C, Shin SK, Yi H. “Flavobacterium magnum sp. nov., Flavobacterium pallidum sp. nov., Flavobacterium crocinum sp. nov. and Flavobacterium album sp. nov.”. International Journal of Systematic and Evolutionary Microbiology 68 (12): 3837-3843. doi:10.1099/ijsem.0.003067. PMID 30320543. Miyashita M, Fujimura S, Nakagawa Y, Nishizawa M, Tomizuka N, Nakagawa T, Nakagawa J. “Flavobacterium algicola sp. nov., isolated from marine algae”. International Journal of Systematic and Evolutionary Microbiology (Pt 2): 344-348. doi:10.1099/ijs.0.009365-0. PMID 19651729. Xu L, Wang HT, Zhang JX, Zhang H, Wang S, Sun JQ. “Flavobacterium alkalisoli sp. nov., isolated from rhizosphere soil of Suaeda salsa”. International Journal of Systematic and Evolutionary Microbiology 70 (6): 3888-3898. doi:10.1099/ijsem.0.004255. PMID 32496180. Lee Y, Jeon CO. “Flavobacterium alvei sp. nov., isolated from a freshwater river”. International Journal of Systematic and Evolutionary Microbiology 68 (6): 1919-1924. doi:10.1099/ijsem.0.002768. PMID 29676721. Bergey's Manual of Systematic Bacteriology, 2nd ed., vol. 1 (The Archaea and the deeply branching and phototrophic Bacteria) (D.R. Boone and R.W. Castenholz, eds.), Springer-Verlag, New York (2001). pp. 465-466.
Bernardet (Jul 1994). “Cutting a Gordian Knot: Emended Classification and Description of the Genus Flavobacterium, Emended Description of the Family Flavobacteriaceae, and Proposal of Flaviobacterium hydatis nom. nov. (Basonym, Cytophaga aquatalis Strohl and Tait 1978)”. Int J Syst Bacteriol 46 (3): 447–53. doi:10.1099/00207713-46-1-128.
