TRO (gen)

Trofinin je protein kojim je kod ljudi kodiran genom TRO.^[5][6][7]

TRO (gen)
Identifikatori
Aliasi	TRO
Vanjski ID-jevi	OMIM: 300132 MGI: 1928994 HomoloGene: 75113 GeneCards: TRO
Lokacija gena (čovjek) Hrom. Hromosom X[1] Bend Xp11.21 Početak 54,920,462 bp[1] Kraj 54,931,431 bp[1]
Lokacija gena (miš) Hrom. Hromosom X (miš)[2] Bend X|X F3 Početak 149,428,300 bp[2] Kraj 149,440,579 bp[2]
Obrazac RNK ekspresije Više referentnih podataka o ekspresiji
Ontologija gena Molekularna funkcija • GO:0001948, GO:0016582 vezivanje za proteine Ćelijska komponenta • ćelijska membrana • integral component of plasma membrane • intrinsic component of plasma membrane Biološki proces • Ćelijska adhezija • embryo implantation • homophilic cell adhesion via plasma membrane adhesion molecules Izvori:Amigo / QuickGO
Ortolozi
Vrste	Čovjek	Miš
Entrez	7216	56191
Ensembl	ENSG00000067445	ENSMUSG00000025272
UniProt	Q12816 Q9BX88	n/a
RefSeq (mRNK)	NM_001039705 NM_001271183 NM_001271184 NM_016157 NM_177556 NM_177557	NM_001002272 NM_001290770 NM_001290771 NM_001290772 NM_019548 NM_207679
RefSeq (bjelančevina)	NP_001034794 NP_001258112 NP_001258113 NP_057241 NP_808224 NP_808225 NP_808225.1	n/a
Lokacija (UCSC)	Chr X: 54.92 – 54.93 Mb	Chr X: 149.43 – 149.44 Mb
PubMed pretraga	[3]	[4]
Wikipodaci
Pogledaj/uredi – čovjek Pogledaj/uredi – miš

Ovaj gen kodira membranski protein koji posreduje apikalnu adheziju ćelija između trofoblastnih ćelija i lumenskih epitel nih ćelija endometrija i upleten je u početno vezanje tokom proces implantacije embriona. Povezan je sa porodicom gena MAGED sa sličnošću sekvenci i lokacijom hromosoma. Za njega je pronađeno je više varijanti alternativno prerađenih transkripta; međutim, priroda nekih varijanti u punoj dužini nije definirana.^[7]

Reference

1. GRCh38: Ensembl release 89: ENSG00000067445 - Ensembl, maj 2017
2. GRCm38: Ensembl release 89: ENSMUSG00000025272 - Ensembl, maj 2017
3. "Human PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
4. "Mouse PubMed Reference:". National Center for Biotechnology Information, U.S. National Library of Medicine.
5. Pack SD, Tanigami A, Ledbetter DH, Sato T, Fukuda MN (Apr 1998). "Assignment of trophoblast/endometrial epithelium cell adhesion molecule trophinin gene TRO to human chromosome bands Xp11.22→p11.21 by in situ hybridization". Cytogenet Cell Genet. 79 (1–2): 123–4. doi:10.1159/000134698. PMID 9533028.
6. Chomez P, De Backer O, Bertrand M, De Plaen E, Boon T, Lucas S (Jul 2001). "An overview of the MAGE gene family with the identification of all human members of the family". Cancer Res. 61 (14): 5544–51. PMID 11454705.
7. "Entrez Gene: TRO trophinin".

Dopunska litratura

• Fukuda MN, Nozawa S (2000). "Trophinin, tastin, and bystin: a complex mediating unique attachment between trophoblastic and endometrial epithelial cells at their respective apical cell membranes". Semin. Reprod. Endocrinol. 17 (3): 229–34. doi:10.1055/s-2007-1016230. PMID 10797941.
• Fukuda MN, Sato T, Nakayama J, et al. (1995). "Trophinin and tastin, a novel cell adhesion molecule complex with potential involvement in embryo implantation". Genes Dev. 9 (10): 1199–210. doi:10.1101/gad.9.10.1199. PMID 7758945.
• Maruyama K, Sugano S (1994). "Oligo-capping: a simple method to replace the cap structure of eukaryotic mRNAs with oligoribonucleotides". Gene. 138 (1–2): 171–4. doi:10.1016/0378-1119(94)90802-8. PMID 8125298.
• Bonaldo MF, Lennon G, Soares MB (1997). "Normalization and subtraction: two approaches to facilitate gene discovery". Genome Res. 6 (9): 791–806. doi:10.1101/gr.6.9.791. PMID 8889548.
• Suzuki Y, Yoshitomo-Nakagawa K, Maruyama K, et al. (1997). "Construction and characterization of a full length-enriched and a 5'-end-enriched cDNA library". Gene. 200 (1–2): 149–56. doi:10.1016/S0378-1119(97)00411-3. PMID 9373149.
• Suzuki N, Zara J, Sato T, et al. (1998). "A cytoplasmic protein, bystin, interacts with trophinin, tastin, and cytokeratin and may be involved in trophinin-mediated cell adhesion between trophoblast and endometrial epithelial cells". Proc. Natl. Acad. Sci. U.S.A. 95 (9): 5027–32. doi:10.1073/pnas.95.9.5027. PMC 20207. PMID 9560222.
• Suzuki N, Nakayama J, Shih IM, et al. (1999). "Expression of trophinin, tastin, and bystin by trophoblast and endometrial cells in human placenta". Biol. Reprod. 60 (3): 621–7. doi:10.1095/biolreprod60.3.621. PMID 10026108.
• Kikuno R, Nagase T, Ishikawa K, et al. (1999). "Prediction of the coding sequences of unidentified human genes. XIV. The complete sequences of 100 new cDNA clones from brain which code for large proteins in vitro". DNA Res. 6 (3): 197–205. doi:10.1093/dnares/6.3.197. PMID 10470851.
• Wang HY, Xing FQ, Chen SL (2002). "Expression of trophinin in the cycling endometrium and its association with infertility". Di Yi Jun Yi Da Xue Xue Bao. 22 (6): 539–41. PMID 12297480.
• Strausberg RL, Feingold EA, Grouse LH, et al. (2003). "Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences". Proc. Natl. Acad. Sci. U.S.A. 99 (26): 16899–903. doi:10.1073/pnas.242603899. PMC 139241. PMID 12477932.
• Imabayashi H, Mori T, Gojo S, et al. (2003). "Redifferentiation of dedifferentiated chondrocytes and chondrogenesis of human bone marrow stromal cells via chondrosphere formation with expression profiling by large-scale cDNA analysis". Exp. Cell Res. 288 (1): 35–50. doi:10.1016/S0014-4827(03)00130-7. PMID 12878157.
• Nakayama J, Aoki D, Suga T, et al. (2004). "Implantation-dependent expression of trophinin by maternal fallopian tube epithelia during tubal pregnancies: possible role of human chorionic gonadotrophin on ectopic pregnancy". Am. J. Pathol. 163 (6): 2211–9. doi:10.1016/S0002-9440(10)63579-1. PMC 1892375. PMID 14633596.
• Ota T, Suzuki Y, Nishikawa T, et al. (2004). "Complete sequencing and characterization of 21,243 full-length human cDNAs". Nat. Genet. 36 (1): 40–5. doi:10.1038/ng1285. PMID 14702039.
• Bertrand M, Huijbers I, Chomez P, De Backer O (2005). "Comparative expression analysis of the MAGED genes during embryogenesis and brain development". Dev. Dyn. 230 (2): 325–34. doi:10.1002/dvdy.20026. PMID 15162511.
• Ross MT, Grafham DV, Coffey AJ, et al. (2005). "The DNA sequence of the human X chromosome". Nature. 434 (7031): 325–37. doi:10.1038/nature03440. PMC 2665286. PMID 15772651.
• Rual JF, Venkatesan K, Hao T, et al. (2005). "Towards a proteome-scale map of the human protein-protein interaction network". Nature. 437 (7062): 1173–8. doi:10.1038/nature04209. PMID 16189514.
• Aoyama J, Nakayama Y, Sugiyama D, et al. (2006). "Apical cell adhesion molecule, trophinin, localizes to the nuclear envelope". FEBS Lett. 579 (28): 6326–32. doi:10.1016/j.febslet.2005.10.012. PMID 16288751.