貝日阿托氏菌科（學名：Beggiatoaceae）為硫髮菌目的一科細菌。此科的模式屬為貝日阿托氏菌屬(Beggiatoa)。
下級分類
本科包括以下屬：
參考文獻
- LPSN - List of Prokaryotic names with Standing in Nomenclature
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