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Signal recognition particle RNA
From Wikipedia, the free encyclopedia
The signal recognition particle RNA, (also known as 7SL, 6S, ffs, or 4.5S RNA) is part of the signal recognition particle (SRP) ribonucleoprotein complex. SRP recognizes the signal peptide and binds to the ribosome, halting protein synthesis. SRP-receptor is a protein that is embedded in a membrane, and which contains a transmembrane pore. When the SRP-ribosome complex binds to SRP-receptor, SRP releases the ribosome and drifts away. The ribosome resumes protein synthesis, but now the protein is moving through the SRP-receptor transmembrane pore.
RN7SL1 | |||||||||||||||||||||||||||||||||||||||||||||||||||
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Aliases | RN7SL1, 7L1a, 7SL, RN7SL, RNSRP1, Signal recognition particle RNA, RNA, 7SL, cytoplasmic 1, RNA component of signal recognition particle 7SL1 | ||||||||||||||||||||||||||||||||||||||||||||||||||
External IDs | OMIM: 612177; GeneCards: RN7SL1; OMA:RN7SL1 - orthologs | ||||||||||||||||||||||||||||||||||||||||||||||||||
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![](http://upload.wikimedia.org/wikipedia/en/thumb/d/d3/HomosapiSRPRNA-2d.png/640px-HomosapiSRPRNA-2d.png)
In this way SRP directs the movement of proteins within the cell to bind with a transmembrane pore which allows the protein to cross the membrane to where it is needed. The RNA and protein components of this complex are highly conserved but do vary between the different kingdoms of life.
The common SINE family Alu probably originated from a 7SL RNA gene after deletion of a central sequence.[3]
The eukaryotic SRP consists of a 300-nucleotide 7S RNA and six proteins: SRPs 72, 68, 54, 19, 14, and 9. Archaeal SRP consists of a 7S RNA and homologues of the eukaryotic SRP19 and SRP54 proteins. Eukaryotic and archaeal 7S RNAs have very similar secondary structures.[4]
In most bacteria, the SRP consists of an RNA molecule (4.5S) and the Ffh protein (a homologue of the eukaryotic SRP54 protein). Some Gram-positive bacteria (e.g. Bacillus subtilis) have a longer eukaryote-like SRP RNA that includes an Alu domain.[5]
In eukaryotes and archaea, eight helical elements fold into the Alu and S domains, separated by a long linker region.[6][7] The Alu domain is thought to mediate the peptide chain elongation retardation function of the SRP.[6] The universally conserved helix which interacts with the SRP54 M domain mediates signal sequence recognition.[7][8] The SRP19-helix 6 complex is thought to be involved in SRP assembly and stabilises helix 8 for SRP54. binding[6] Humans have three functional SRP RNA genes, conveniently named RN7SL1, RN7SL2, and RN7SL3. The human genome in particular is known to contain a large amount of SRP RNA related sequence, including Alu repeats.[5]